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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.8
nTPM
Monaco:
117.7
nTPM
Schmiedel:
48.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.8
HPA sample
nTPM
gdT-cell nTPM: 49.6
Samples: 6
Max nTPM: 63.4
Min nTPM: 32.5
P10809_1007
32.5
P10809_1022
63.4
P10809_1041
52.3
P10809_1060
52.9
P10809_1077
45.8
P10809_1098
50.9
MAIT T-cell nTPM: 35.8
Samples: 6
Max nTPM: 42.1
Min nTPM: 27.0
P10809_1006
27.0
P10809_1024
35.1
P10809_1043
42.0
P10809_1062
36.5
P10809_1083
32.3
P10809_1097
42.1
Memory CD4 T-cell nTPM: 43.2
Samples: 6
Max nTPM: 49.1
Min nTPM: 36.5
P10809_1014
36.5
P10809_1026
49.1
P10809_1045
42.2
P10809_1064
46.2
P10809_1086
37.8
P10809_1113
47.1
Memory CD8 T-cell nTPM: 53.0
Samples: 5
Max nTPM: 65.4
Min nTPM: 42.7
P10809_1012
44.5
P10809_1027
65.4
P10809_1046
50.3
P10809_1065
42.7
P10809_1111
62.3
Naive CD4 T-cell nTPM: 34.2
Samples: 6
Max nTPM: 44.8
Min nTPM: 20.6
P10809_1015
22.4
P10809_1030
20.6
P10809_1049
42.0
P10809_1068
34.5
P10809_1085
44.8
P10809_1112
40.6
Naive CD8 T-cell nTPM: 39.1
Samples: 6
Max nTPM: 43.8
Min nTPM: 28.5
P10809_1016
28.5
P10809_1031
43.4
P10809_1050
39.4
P10809_1069
39.1
P10809_1087
40.3
P10809_1110
43.8
T-reg nTPM: 96.9
Samples: 6
Max nTPM: 109.0
Min nTPM: 77.4
P10809_1018
109.0
P10809_1037
102.9
P10809_1056
77.4
P10809_1075
86.1
P10809_1094
102.0
P10809_1106
103.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.9
Samples: 4
Max nTPM: 66.7
Min nTPM: 49.0
RHH5202_R3573
66.7
RHH5230_R3602
49.0
RHH5259_R3631
61.0
RHH5288_R3660
62.9
Effector memory CD8 T-cell nTPM: 117.7
Samples: 4
Max nTPM: 189.2
Min nTPM: 68.2
RHH5203_R3574
189.2
RHH5231_R3603
68.2
RHH5260_R3632
130.0
RHH5289_R3661
83.5
MAIT T-cell nTPM: 51.4
Samples: 4
Max nTPM: 66.3
Min nTPM: 36.6
RHH5233_R3605
44.9
RHH5205_R3576
66.3
RHH5262_R3634
36.6
RHH5297_R3663
57.8
Memory CD4 T-cell TFH nTPM: 64.2
Samples: 4
Max nTPM: 70.6
Min nTPM: 57.0
RHH5300_R3666
57.0
RHH5236_R3608
70.6
RHH5265_R3637
70.2
RHH5208_R3579
58.8
Memory CD4 T-cell Th1 nTPM: 71.5
Samples: 4
Max nTPM: 86.0
Min nTPM: 59.0
RHH5210_R3581
59.0
RHH5302_R3668
67.6
RHH5238_R3610
73.5
RHH5267_R3639
86.0
Memory CD4 T-cell Th1/Th17 nTPM: 56.7
Samples: 4
Max nTPM: 70.8
Min nTPM: 46.5
RHH5303_R3669
59.4
RHH5211_R3582
50.0
RHH5239_R3611
70.8
RHH5268_R3640
46.5
Memory CD4 T-cell Th17 nTPM: 64.7
Samples: 4
Max nTPM: 76.7
Min nTPM: 54.0
RHH5304_R3670
62.2
RHH5212_R3583
54.0
RHH5240_R3612
66.0
RHH5269_R3641
76.7
Memory CD4 T-cell Th2 nTPM: 54.4
Samples: 4
Max nTPM: 67.3
Min nTPM: 36.1
RHH5305_R3671
53.4
RHH5213_R3584
60.8
RHH5241_R3613
36.1
RHH5270_R3642
67.3
Naive CD4 T-cell nTPM: 50.1
Samples: 4
Max nTPM: 55.1
Min nTPM: 43.2
RHH5306_R3672
50.3
RHH5214_R3585
51.8
RHH5242_R3614
43.2
RHH5271_R3643
55.1
Naive CD8 T-cell nTPM: 53.6
Samples: 4
Max nTPM: 61.4
Min nTPM: 49.1
RHH5201_R3572
49.1
RHH5229_R3601
61.4
RHH5258_R3630
51.1
RHH5287_R3659
52.6
Non-Vd2 gdTCR nTPM: 89.1
Samples: 4
Max nTPM: 103.5
Min nTPM: 77.8
RHH5235_R3607
84.9
RHH5264_R3636
90.2
RHH5207_R3578
103.5
RHH5299_R3665
77.8
T-reg nTPM: 101.7
Samples: 4
Max nTPM: 113.3
Min nTPM: 78.4
RHH5301_R3667
113.3
RHH5237_R3609
109.8
RHH5266_R3638
78.4
RHH5209_R3580
105.2
Terminal effector memory CD4 T-cell nTPM: 79.8
Samples: 2
Max nTPM: 94.5
Min nTPM: 65.1
RHH5243_R3615
65.1
RHH5272_R3644
94.5
Terminal effector memory CD8 T-cell nTPM: 81.0
Samples: 4
Max nTPM: 100.9
Min nTPM: 67.6
RHH5232_R3604
100.9
RHH5204_R3575
67.6
RHH5261_R3633
80.9
RHH5296_R3662
74.4
Vd2 gdTCR nTPM: 59.8
Samples: 4
Max nTPM: 77.1
Min nTPM: 39.8
RHH5234_R3606
39.8
RHH5206_R3577
58.4
RHH5263_R3635
77.1
RHH5298_R3664
63.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
