HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:56.5 nTPM
HPA Brain:102.3 nTPM
GTEx:56.5 nTPM
FANTOM5:50.5 Scaled Tags Per Million
Pig:63.1 nTPM
Mouse:22.0 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048677Antibody HPA056480Antibody CAB011574
Glial cells LowNot detectedMedium
Neuronal cells LowNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.3
Sample id Sample description nTPM
Hippocampus
nTPM: 84.6
2621 Female, age 67, right hemisphere 99.2
2529 Female, age 94, left hemisphere 88.8
1898 Male, age 80, left hemisphere 84.5
1911 Female, age 85, right hemisphere 83.1
2148 Female, age 91, left hemisphere 82.9
1855 Male, age 76, left hemisphere 68.8
Dentate gyrus
nTPM: 82.6
2531 Female, age 67, both hemispheres 101.0
2530 Female, age 94, left hemisphere 95.9
1927 Female, age 91, both hemispheres 84.8
2528 Male, age 74, both hemispheres 75.5
2246 Female, age 85, both hemispheres 75.1
2010 Male, age 76, both hemispheres 63.2
Entorhinal gyrus
nTPM: 99.0
2613 Female, age 94, left hemisphere 113.2
2764 Male, age 80, right hemisphere 107.7
2686 Male, age 75, right hemisphere 106.5
1787 Male, age 76, left hemisphere 95.8
1938 Female, age 85, left hemisphere 90.9
2117 Female, age 91, right hemisphere 79.9
Hippocampus, CA1
nTPM: 77.1
2749 Male, age 80, left hemisphere 83.4
2527 Male, age 74, both hemispheres 81.6
1873 Female, age 85, both hemispheres 81.5
2082 Female, age 91, right hemisphere 81.1
2045 Male, age 76, both hemispheres 58.1
Hippocampus, CA2
nTPM: 87.6
2437 Female, age 94, left hemisphere 103.8
1892 Male, age 76, both hemispheres 99.4
1963 Male, age 80, left hemisphere 98.2
2113 Female, age 91, right hemisphere 82.6
1940 Female, age 85, left hemisphere 73.2
2249 Male, age 74, both hemispheres 68.2
Hippocampus, CA3
nTPM: 90.3
2861 Female, age 67, both hemispheres 119.5
2137 Male, age 80, left hemisphere 89.3
2620 Female, age 94, left hemisphere 88.0
1867 Male, age 76, both hemispheres 86.3
1891 Female, age 85, both hemispheres 82.2
2436 Male, age 74, both hemispheres 76.3
Parahippocampal cortex
nTPM: 93.4
2622 Female, age 67, right hemisphere 113.3
2532 Female, age 72, left hemisphere 99.0
2693 Female, age 94, both hemispheres 98.1
2245 Female, age 91, both hemispheres 96.7
1850 Male, age 80, both hemispheres 95.8
1990 Female, age 91, right hemisphere 92.9
1933 Female, age 85, both hemispheres 91.4
2692 Male, age 74, both hemispheres 90.9
2250 Female, age 67, right hemisphere 80.6
2018 Male, age 76, both hemispheres 75.2
Perirhinal gyrus
nTPM: 102.3
1794 Male, age 80, right hemisphere 111.5
1841 Female, age 85, right hemisphere 105.7
1847 Female, age 91, left hemisphere 100.4
2848 Male, age 76, right hemisphere 97.6
2521 Female, age 94, right hemisphere 96.3
Subiculum
nTPM: 82.6
2619 Male, age 74, both hemispheres 97.3
2438 Female, age 94, left hemisphere 93.8
1977 Female, age 85, both hemispheres 88.5
1901 Male, age 80, both hemispheres 80.5
2729 Female, age 91, right hemisphere 68.6
2042 Male, age 76, both hemispheres 67.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.5
Samples: 197

Max nTPM: 134.6
Min nTPM: 12.4
Std nTPM: 21.1
Median nTPM: 50.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 134.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 123.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 118.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 118.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 118.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 113.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 101.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 100.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 98.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 98.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 98.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.5
FF:10153-102I9 76 years, female 65.8
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.1
Pig sample Sample description nTPM
Subiculum
nTPM: 56.9
Samples: 4

Max nTPM: 71.7
Min nTPM: 44.3
Sample A Female 71.7
Sample B Female 55.0
Sample C Male 56.6
Sample D Male 44.3
Dorsal hippocampus
nTPM: 57.3
Samples: 4

Max nTPM: 67.3
Min nTPM: 43.0
Sample A Female 67.3
Sample B Female 65.1
Sample C Male 53.7
Sample D Male 43.0
Entorhinal cortex
nTPM: 62.9
Samples: 4

Max nTPM: 77.4
Min nTPM: 49.3
Sample A Female 61.4
Sample B Female 63.3
Sample C Male 77.4
Sample D Male 49.3
Ventral hippocampus
nTPM: 63.1
Samples: 4

Max nTPM: 76.1
Min nTPM: 50.2
Sample A Female 50.2
Sample B Female 55.4
Sample C Male 70.7
Sample D Male 76.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.8
Sample A Male 23.9
Sample B Male 24.4
Sample C Female 19.8
Sample D Female 19.8
Hippocampal formation
nTPM: 20.7
Samples: 4

Max nTPM: 22.7
Min nTPM: 19.2
Sample A Male 20.2
Sample B Male 20.5
Sample C Female 19.2
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68446081 Antisense, RP_050113_01_E03, Mouse strain C57BL/6J (56 days, male) 2.2

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