HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:104.1 nTPM
HPA Brain:85.2 nTPM
GTEx:104.1 nTPM
FANTOM5:75.7 Scaled Tags Per Million
Pig:52.9 nTPM
Mouse:99.6 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000913
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.2
Sample id Sample description nTPM
Hippocampus
nTPM: 83.4
2621 Female, age 67, right hemisphere 97.6
1898 Male, age 80, left hemisphere 90.2
1911 Female, age 85, right hemisphere 89.9
2148 Female, age 91, left hemisphere 79.1
1855 Male, age 76, left hemisphere 73.8
2529 Female, age 94, left hemisphere 69.8
Dentate gyrus
nTPM: 73.1
2531 Female, age 67, both hemispheres 90.3
1927 Female, age 91, both hemispheres 81.3
2530 Female, age 94, left hemisphere 71.7
2010 Male, age 76, both hemispheres 69.0
2528 Male, age 74, both hemispheres 63.3
2246 Female, age 85, both hemispheres 62.8
Entorhinal gyrus
nTPM: 75.0
2613 Female, age 94, left hemisphere 89.0
2686 Male, age 75, right hemisphere 77.3
2764 Male, age 80, right hemisphere 74.7
1938 Female, age 85, left hemisphere 74.0
1787 Male, age 76, left hemisphere 69.6
2117 Female, age 91, right hemisphere 65.2
Hippocampus, CA1
nTPM: 85.2
2749 Male, age 80, left hemisphere 118.4
1873 Female, age 85, both hemispheres 80.5
2082 Female, age 91, right hemisphere 77.8
2527 Male, age 74, both hemispheres 76.7
2045 Male, age 76, both hemispheres 72.8
Hippocampus, CA2
nTPM: 79.1
1963 Male, age 80, left hemisphere 115.7
2113 Female, age 91, right hemisphere 77.6
1940 Female, age 85, left hemisphere 75.0
2437 Female, age 94, left hemisphere 72.4
1892 Male, age 76, both hemispheres 70.3
2249 Male, age 74, both hemispheres 63.6
Hippocampus, CA3
nTPM: 84.2
2137 Male, age 80, left hemisphere 105.2
2861 Female, age 67, both hemispheres 93.3
2620 Female, age 94, left hemisphere 82.6
2436 Male, age 74, both hemispheres 79.5
1867 Male, age 76, both hemispheres 73.8
1891 Female, age 85, both hemispheres 70.6
Parahippocampal cortex
nTPM: 73.4
1933 Female, age 85, both hemispheres 83.0
2245 Female, age 91, both hemispheres 80.8
2693 Female, age 94, both hemispheres 78.0
2622 Female, age 67, right hemisphere 76.9
2018 Male, age 76, both hemispheres 76.5
2532 Female, age 72, left hemisphere 73.0
1850 Male, age 80, both hemispheres 72.9
1990 Female, age 91, right hemisphere 65.8
2692 Male, age 74, both hemispheres 63.8
2250 Female, age 67, right hemisphere 63.3
Perirhinal gyrus
nTPM: 80.1
1847 Female, age 91, left hemisphere 95.0
1794 Male, age 80, right hemisphere 83.9
1841 Female, age 85, right hemisphere 80.3
2521 Female, age 94, right hemisphere 79.7
2848 Male, age 76, right hemisphere 61.6
Subiculum
nTPM: 66.1
1901 Male, age 80, both hemispheres 81.1
1977 Female, age 85, both hemispheres 72.5
2729 Female, age 91, right hemisphere 67.2
2042 Male, age 76, both hemispheres 67.0
2619 Male, age 74, both hemispheres 61.2
2438 Female, age 94, left hemisphere 47.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 104.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 104.1
Samples: 197

Max nTPM: 247.4
Min nTPM: 31.0
Std nTPM: 34.8
Median nTPM: 100.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 247.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 216.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 202.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 191.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 186.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 183.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 183.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 182.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 179.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 168.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 161.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.7
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 74.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.9
Pig sample Sample description nTPM
Subiculum
nTPM: 43.1
Samples: 4

Max nTPM: 56.2
Min nTPM: 34.3
Sample A Female 56.2
Sample B Female 39.7
Sample C Male 42.0
Sample D Male 34.3
Dorsal hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 51.9
Min nTPM: 34.9
Sample A Female 51.9
Sample B Female 44.1
Sample C Male 40.4
Sample D Male 34.9
Entorhinal cortex
nTPM: 52.9
Samples: 4

Max nTPM: 60.9
Min nTPM: 44.4
Sample A Female 51.1
Sample B Female 55.3
Sample C Male 60.9
Sample D Male 44.4
Ventral hippocampus
nTPM: 44.8
Samples: 4

Max nTPM: 53.2
Min nTPM: 37.1
Sample A Female 40.0
Sample B Female 37.1
Sample C Male 53.2
Sample D Male 48.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.6
Samples: 4

Max nTPM: 103.4
Min nTPM: 95.9
Sample A Male 103.4
Sample B Male 102.0
Sample C Female 97.2
Sample D Female 95.9
Hippocampal formation
nTPM: 84.6
Samples: 4

Max nTPM: 98.3
Min nTPM: 73.4
Sample A Male 98.3
Sample B Male 83.0
Sample C Female 73.4
Sample D Female 83.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
70194982 Antisense, RP_050517_02_B06, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org