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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.7
nTPM
Monaco:
203.8
nTPM
Schmiedel:
0.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.7
HPA sample
nTPM
gdT-cell nTPM: 40.7
Samples: 6
Max nTPM: 54.7
Min nTPM: 19.8
P10809_1007
54.7
P10809_1022
48.7
P10809_1041
39.9
P10809_1060
19.8
P10809_1077
46.6
P10809_1098
34.2
MAIT T-cell nTPM: 42.4
Samples: 6
Max nTPM: 58.8
Min nTPM: 26.2
P10809_1006
58.8
P10809_1024
41.0
P10809_1043
41.9
P10809_1062
26.2
P10809_1083
48.1
P10809_1097
38.3
Memory CD4 T-cell nTPM: 36.8
Samples: 6
Max nTPM: 64.2
Min nTPM: 18.2
P10809_1014
64.2
P10809_1026
35.4
P10809_1045
48.1
P10809_1064
24.4
P10809_1086
30.7
P10809_1113
18.2
Memory CD8 T-cell nTPM: 44.1
Samples: 5
Max nTPM: 63.6
Min nTPM: 33.2
P10809_1012
63.6
P10809_1027
44.5
P10809_1046
43.9
P10809_1065
33.2
P10809_1111
35.1
Naive CD4 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 81.0
Min nTPM: 36.7
P10809_1015
81.0
P10809_1030
56.8
P10809_1049
38.1
P10809_1068
48.0
P10809_1085
37.6
P10809_1112
36.7
Naive CD8 T-cell nTPM: 42.2
Samples: 6
Max nTPM: 64.9
Min nTPM: 22.3
P10809_1016
64.9
P10809_1031
52.5
P10809_1050
37.3
P10809_1069
37.3
P10809_1087
22.3
P10809_1110
38.6
T-reg nTPM: 33.8
Samples: 6
Max nTPM: 44.4
Min nTPM: 23.1
P10809_1018
30.7
P10809_1037
44.4
P10809_1056
38.8
P10809_1075
23.1
P10809_1094
32.4
P10809_1106
33.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.8
Samples: 4
Max nTPM: 226.5
Min nTPM: 70.4
RHH5202_R3573
70.4
RHH5230_R3602
226.5
RHH5259_R3631
132.3
RHH5288_R3660
114.0
Effector memory CD8 T-cell nTPM: 163.9
Samples: 4
Max nTPM: 215.9
Min nTPM: 114.5
RHH5203_R3574
121.8
RHH5231_R3603
215.9
RHH5260_R3632
203.3
RHH5289_R3661
114.5
MAIT T-cell nTPM: 170.6
Samples: 4
Max nTPM: 222.3
Min nTPM: 119.8
RHH5233_R3605
119.8
RHH5205_R3576
215.9
RHH5262_R3634
222.3
RHH5297_R3663
124.5
Memory CD4 T-cell TFH nTPM: 122.2
Samples: 4
Max nTPM: 172.4
Min nTPM: 45.2
RHH5300_R3666
136.2
RHH5236_R3608
172.4
RHH5265_R3637
134.9
RHH5208_R3579
45.2
Memory CD4 T-cell Th1 nTPM: 143.8
Samples: 4
Max nTPM: 167.9
Min nTPM: 119.2
RHH5210_R3581
161.3
RHH5302_R3668
119.2
RHH5238_R3610
126.9
RHH5267_R3639
167.9
Memory CD4 T-cell Th1/Th17 nTPM: 167.5
Samples: 4
Max nTPM: 198.3
Min nTPM: 90.4
RHH5303_R3669
90.4
RHH5211_R3582
198.3
RHH5239_R3611
183.6
RHH5268_R3640
197.5
Memory CD4 T-cell Th17 nTPM: 185.4
Samples: 4
Max nTPM: 229.4
Min nTPM: 126.3
RHH5304_R3670
126.3
RHH5212_R3583
223.0
RHH5240_R3612
162.7
RHH5269_R3641
229.4
Memory CD4 T-cell Th2 nTPM: 203.8
Samples: 4
Max nTPM: 245.1
Min nTPM: 141.8
RHH5305_R3671
198.8
RHH5213_R3584
229.6
RHH5241_R3613
141.8
RHH5270_R3642
245.1
Naive CD4 T-cell nTPM: 203.7
Samples: 4
Max nTPM: 257.4
Min nTPM: 113.9
RHH5306_R3672
221.6
RHH5214_R3585
257.4
RHH5242_R3614
113.9
RHH5271_R3643
221.7
Naive CD8 T-cell nTPM: 172.1
Samples: 4
Max nTPM: 232.8
Min nTPM: 63.5
RHH5201_R3572
63.5
RHH5229_R3601
232.8
RHH5258_R3630
178.9
RHH5287_R3659
213.2
Non-Vd2 gdTCR nTPM: 171.5
Samples: 4
Max nTPM: 205.8
Min nTPM: 147.6
RHH5235_R3607
205.8
RHH5264_R3636
147.6
RHH5207_R3578
155.2
RHH5299_R3665
177.5
T-reg nTPM: 159.4
Samples: 4
Max nTPM: 178.1
Min nTPM: 129.2
RHH5301_R3667
129.2
RHH5237_R3609
178.1
RHH5266_R3638
174.1
RHH5209_R3580
156.0
Terminal effector memory CD4 T-cell nTPM: 183.9
Samples: 2
Max nTPM: 230.7
Min nTPM: 137.0
RHH5243_R3615
230.7
RHH5272_R3644
137.0
Terminal effector memory CD8 T-cell nTPM: 178.8
Samples: 4
Max nTPM: 248.0
Min nTPM: 120.8
RHH5232_R3604
176.9
RHH5204_R3575
169.6
RHH5261_R3633
248.0
RHH5296_R3662
120.8
Vd2 gdTCR nTPM: 175.6
Samples: 4
Max nTPM: 199.1
Min nTPM: 155.0
RHH5234_R3606
155.0
RHH5206_R3577
180.7
RHH5263_R3635
199.1
RHH5298_R3664
167.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
