HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:40.0 nTPM
HPA Brain:72.6 nTPM
GTEx:40.0 nTPM
FANTOM5:98.9 Scaled Tags Per Million
Pig:62.6 nTPM
Mouse:42.0 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001636Antibody HPA001637Antibody CAB010822
Glial cells LowLowNot detected
Neuronal cells LowLowNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 67.4
2529 Female, age 94, left hemisphere 77.2
1911 Female, age 85, right hemisphere 72.8
2148 Female, age 91, left hemisphere 70.7
2621 Female, age 67, right hemisphere 64.3
1855 Male, age 76, left hemisphere 63.5
1898 Male, age 80, left hemisphere 56.0
Dentate gyrus
nTPM: 60.4
2528 Male, age 74, both hemispheres 65.0
2530 Female, age 94, left hemisphere 64.2
2246 Female, age 85, both hemispheres 62.2
2010 Male, age 76, both hemispheres 61.9
2531 Female, age 67, both hemispheres 56.9
1927 Female, age 91, both hemispheres 51.9
Entorhinal gyrus
nTPM: 62.8
2117 Female, age 91, right hemisphere 84.8
2686 Male, age 75, right hemisphere 66.1
2764 Male, age 80, right hemisphere 62.8
1938 Female, age 85, left hemisphere 58.2
1787 Male, age 76, left hemisphere 53.4
2613 Female, age 94, left hemisphere 51.3
Hippocampus, CA1
nTPM: 60.4
2527 Male, age 74, both hemispheres 66.2
1873 Female, age 85, both hemispheres 64.6
2082 Female, age 91, right hemisphere 64.4
2045 Male, age 76, both hemispheres 55.0
2749 Male, age 80, left hemisphere 51.9
Hippocampus, CA2
nTPM: 59.6
2113 Female, age 91, right hemisphere 68.2
1963 Male, age 80, left hemisphere 64.4
2249 Male, age 74, both hemispheres 63.7
2437 Female, age 94, left hemisphere 61.5
1940 Female, age 85, left hemisphere 53.8
1892 Male, age 76, both hemispheres 45.9
Hippocampus, CA3
nTPM: 59.0
1891 Female, age 85, both hemispheres 74.7
2861 Female, age 67, both hemispheres 59.2
1867 Male, age 76, both hemispheres 58.3
2137 Male, age 80, left hemisphere 55.3
2620 Female, age 94, left hemisphere 53.9
2436 Male, age 74, both hemispheres 52.3
Parahippocampal cortex
nTPM: 59.4
2692 Male, age 74, both hemispheres 68.3
1990 Female, age 91, right hemisphere 65.2
2245 Female, age 91, both hemispheres 63.1
2532 Female, age 72, left hemisphere 62.8
2018 Male, age 76, both hemispheres 61.9
1850 Male, age 80, both hemispheres 59.0
2622 Female, age 67, right hemisphere 57.9
1933 Female, age 85, both hemispheres 55.6
2693 Female, age 94, both hemispheres 51.5
2250 Female, age 67, right hemisphere 48.2
Perirhinal gyrus
nTPM: 52.3
2848 Male, age 76, right hemisphere 57.3
2521 Female, age 94, right hemisphere 52.5
1841 Female, age 85, right hemisphere 52.2
1794 Male, age 80, right hemisphere 51.2
1847 Female, age 91, left hemisphere 48.2
Subiculum
nTPM: 72.6
2438 Female, age 94, left hemisphere 84.8
2042 Male, age 76, both hemispheres 77.4
1901 Male, age 80, both hemispheres 73.4
2729 Female, age 91, right hemisphere 69.6
2619 Male, age 74, both hemispheres 65.8
1977 Female, age 85, both hemispheres 64.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.0
Samples: 197

Max nTPM: 79.7
Min nTPM: 11.3
Std nTPM: 14.2
Median nTPM: 37.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 79.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 78.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 77.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 76.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 75.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 75.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 71.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 71.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 69.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 68.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 67.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.9
FF:10153-102I9 76 years, female 135.4
FF:10169-103B7 60 years, female 62.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.6
Pig sample Sample description nTPM
Subiculum
nTPM: 61.7
Samples: 4

Max nTPM: 65.8
Min nTPM: 59.3
Sample A Female 65.8
Sample B Female 59.5
Sample C Male 59.3
Sample D Male 62.0
Dorsal hippocampus
nTPM: 62.6
Samples: 4

Max nTPM: 70.5
Min nTPM: 53.3
Sample A Female 68.4
Sample B Female 58.1
Sample C Male 70.5
Sample D Male 53.3
Entorhinal cortex
nTPM: 52.3
Samples: 4

Max nTPM: 58.7
Min nTPM: 44.5
Sample A Female 58.7
Sample B Female 53.0
Sample C Male 52.8
Sample D Male 44.5
Ventral hippocampus
nTPM: 60.1
Samples: 4

Max nTPM: 67.1
Min nTPM: 55.8
Sample A Female 56.5
Sample B Female 55.8
Sample C Male 67.1
Sample D Male 60.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.0
Samples: 4

Max nTPM: 43.3
Min nTPM: 40.0
Sample A Male 42.7
Sample B Male 42.0
Sample C Female 40.0
Sample D Female 43.3
Hippocampal formation
nTPM: 35.5
Samples: 4

Max nTPM: 38.5
Min nTPM: 32.9
Sample A Male 35.5
Sample B Male 38.5
Sample C Female 35.0
Sample D Female 32.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69981013 Antisense, RP_050512_04_E02, Mouse strain C57BL/6J (56 days, male) 1.1

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