HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:127.7 nTPM
HPA Brain:58.7 nTPM
GTEx:127.7 nTPM
FANTOM5:158.4 Scaled Tags Per Million
Pig:73.2 nTPM
Mouse:155.7 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061291
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.7
Sample id Sample description nTPM
Hippocampus
nTPM: 54.4
1898 Male, age 80, left hemisphere 65.0
2621 Female, age 67, right hemisphere 59.1
2529 Female, age 94, left hemisphere 56.4
1855 Male, age 76, left hemisphere 54.5
1911 Female, age 85, right hemisphere 48.4
2148 Female, age 91, left hemisphere 42.9
Dentate gyrus
nTPM: 48.3
2530 Female, age 94, left hemisphere 60.9
2010 Male, age 76, both hemispheres 54.5
1927 Female, age 91, both hemispheres 45.5
2246 Female, age 85, both hemispheres 45.3
2531 Female, age 67, both hemispheres 43.9
2528 Male, age 74, both hemispheres 39.5
Entorhinal gyrus
nTPM: 48.6
2764 Male, age 80, right hemisphere 57.1
1787 Male, age 76, left hemisphere 53.8
1938 Female, age 85, left hemisphere 48.3
2117 Female, age 91, right hemisphere 44.4
2686 Male, age 75, right hemisphere 44.1
2613 Female, age 94, left hemisphere 44.0
Hippocampus, CA1
nTPM: 53.3
2749 Male, age 80, left hemisphere 80.8
2527 Male, age 74, both hemispheres 59.5
2045 Male, age 76, both hemispheres 50.5
1873 Female, age 85, both hemispheres 45.5
2082 Female, age 91, right hemisphere 30.2
Hippocampus, CA2
nTPM: 47.6
1892 Male, age 76, both hemispheres 61.3
2437 Female, age 94, left hemisphere 53.4
1963 Male, age 80, left hemisphere 47.9
2249 Male, age 74, both hemispheres 45.2
1940 Female, age 85, left hemisphere 40.5
2113 Female, age 91, right hemisphere 37.5
Hippocampus, CA3
nTPM: 50.4
2137 Male, age 80, left hemisphere 58.9
1867 Male, age 76, both hemispheres 58.2
2436 Male, age 74, both hemispheres 51.9
1891 Female, age 85, both hemispheres 50.8
2861 Female, age 67, both hemispheres 49.6
2620 Female, age 94, left hemisphere 33.1
Parahippocampal cortex
nTPM: 49.8
1850 Male, age 80, both hemispheres 61.9
1933 Female, age 85, both hemispheres 54.8
1990 Female, age 91, right hemisphere 54.7
2245 Female, age 91, both hemispheres 53.7
2250 Female, age 67, right hemisphere 53.3
2622 Female, age 67, right hemisphere 50.9
2532 Female, age 72, left hemisphere 48.2
2018 Male, age 76, both hemispheres 47.8
2692 Male, age 74, both hemispheres 39.5
2693 Female, age 94, both hemispheres 33.7
Perirhinal gyrus
nTPM: 58.7
1847 Female, age 91, left hemisphere 72.5
1794 Male, age 80, right hemisphere 62.2
2521 Female, age 94, right hemisphere 59.7
1841 Female, age 85, right hemisphere 57.8
2848 Male, age 76, right hemisphere 41.5
Subiculum
nTPM: 48.4
1901 Male, age 80, both hemispheres 60.5
2042 Male, age 76, both hemispheres 56.9
1977 Female, age 85, both hemispheres 55.1
2619 Male, age 74, both hemispheres 52.5
2438 Female, age 94, left hemisphere 38.7
2729 Female, age 91, right hemisphere 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.7
Samples: 197

Max nTPM: 281.6
Min nTPM: 66.7
Std nTPM: 36.7
Median nTPM: 121.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 281.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 263.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 258.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 250.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 241.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 234.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 223.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 218.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 209.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 206.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 195.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 158.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 158.4
FF:10169-103B7 60 years, female 201.4
FF:10153-102I9 76 years, female 115.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.2
Pig sample Sample description nTPM
Subiculum
nTPM: 62.1
Samples: 4

Max nTPM: 83.1
Min nTPM: 53.6
Sample A Female 83.1
Sample B Female 53.9
Sample C Male 53.6
Sample D Male 57.7
Dorsal hippocampus
nTPM: 73.2
Samples: 4

Max nTPM: 101.4
Min nTPM: 54.4
Sample A Female 101.4
Sample B Female 61.8
Sample C Male 75.2
Sample D Male 54.4
Entorhinal cortex
nTPM: 62.9
Samples: 4

Max nTPM: 70.0
Min nTPM: 53.5
Sample A Female 60.0
Sample B Female 68.0
Sample C Male 70.0
Sample D Male 53.5
Ventral hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 80.9
Min nTPM: 46.6
Sample A Female 67.2
Sample B Female 46.6
Sample C Male 80.9
Sample D Male 69.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 155.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 145.5
Samples: 4

Max nTPM: 155.9
Min nTPM: 136.3
Sample A Male 136.3
Sample B Male 155.9
Sample C Female 148.9
Sample D Female 141.0
Hippocampal formation
nTPM: 155.7
Samples: 4

Max nTPM: 167.2
Min nTPM: 143.4
Sample A Male 145.6
Sample B Male 143.4
Sample C Female 166.7
Sample D Female 167.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
68632631 Antisense, RP_050125_01_H10, Mouse strain C57BL/6J (56 days, male) 2.7

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