HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:14.9 nTPM
HPA Brain:61.5 nTPM
GTEx:14.9 nTPM
FANTOM5:57.2 Scaled Tags Per Million
Pig:24.5 nTPM
Mouse:18.6 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071709
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
1911 Female, age 85, right hemisphere 62.4
2621 Female, age 67, right hemisphere 57.3
1898 Male, age 80, left hemisphere 56.3
2529 Female, age 94, left hemisphere 54.4
2148 Female, age 91, left hemisphere 49.4
1855 Male, age 76, left hemisphere 41.8
Dentate gyrus
nTPM: 54.0
2530 Female, age 94, left hemisphere 60.9
1927 Female, age 91, both hemispheres 58.4
2246 Female, age 85, both hemispheres 53.7
2531 Female, age 67, both hemispheres 53.3
2528 Male, age 74, both hemispheres 49.2
2010 Male, age 76, both hemispheres 48.4
Entorhinal gyrus
nTPM: 56.9
2686 Male, age 75, right hemisphere 67.5
1938 Female, age 85, left hemisphere 59.4
2613 Female, age 94, left hemisphere 58.8
2117 Female, age 91, right hemisphere 56.7
1787 Male, age 76, left hemisphere 51.7
2764 Male, age 80, right hemisphere 47.3
Hippocampus, CA1
nTPM: 49.2
1873 Female, age 85, both hemispheres 54.3
2527 Male, age 74, both hemispheres 53.0
2082 Female, age 91, right hemisphere 51.3
2749 Male, age 80, left hemisphere 44.2
2045 Male, age 76, both hemispheres 43.3
Hippocampus, CA2
nTPM: 55.7
1963 Male, age 80, left hemisphere 62.2
2113 Female, age 91, right hemisphere 59.2
1940 Female, age 85, left hemisphere 57.3
1892 Male, age 76, both hemispheres 52.1
2437 Female, age 94, left hemisphere 52.0
2249 Male, age 74, both hemispheres 51.2
Hippocampus, CA3
nTPM: 50.0
1891 Female, age 85, both hemispheres 67.3
1867 Male, age 76, both hemispheres 52.0
2436 Male, age 74, both hemispheres 52.0
2137 Male, age 80, left hemisphere 47.0
2861 Female, age 67, both hemispheres 45.5
2620 Female, age 94, left hemisphere 36.1
Parahippocampal cortex
nTPM: 55.7
2692 Male, age 74, both hemispheres 68.4
1933 Female, age 85, both hemispheres 60.7
2532 Female, age 72, left hemisphere 59.8
1990 Female, age 91, right hemisphere 57.9
1850 Male, age 80, both hemispheres 56.9
2245 Female, age 91, both hemispheres 54.5
2693 Female, age 94, both hemispheres 54.2
2250 Female, age 67, right hemisphere 52.4
2018 Male, age 76, both hemispheres 47.7
2622 Female, age 67, right hemisphere 44.5
Perirhinal gyrus
nTPM: 52.2
1841 Female, age 85, right hemisphere 54.5
1847 Female, age 91, left hemisphere 54.0
2848 Male, age 76, right hemisphere 52.5
1794 Male, age 80, right hemisphere 51.7
2521 Female, age 94, right hemisphere 48.4
Subiculum
nTPM: 61.5
2438 Female, age 94, left hemisphere 71.3
1901 Male, age 80, both hemispheres 69.6
2042 Male, age 76, both hemispheres 63.1
1977 Female, age 85, both hemispheres 58.7
2729 Female, age 91, right hemisphere 55.8
2619 Male, age 74, both hemispheres 50.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 36.8
Min nTPM: 5.8
Std nTPM: 6.0
Median nTPM: 13.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 36.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 35.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 33.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 32.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 32.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 32.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 29.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 28.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 27.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 26.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.2
FF:10153-102I9 76 years, female 70.9
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.5
Pig sample Sample description nTPM
Subiculum
nTPM: 23.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.7
Sample A Female 25.5
Sample B Female 22.0
Sample C Male 21.7
Sample D Male 23.0
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 21.4
Sample A Female 25.2
Sample B Female 21.4
Sample C Male 22.3
Sample D Male 27.7
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 27.2
Min nTPM: 19.7
Sample A Female 24.4
Sample B Female 27.2
Sample C Male 26.6
Sample D Male 19.7
Ventral hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 23.3
Min nTPM: 19.3
Sample A Female 23.3
Sample B Female 23.1
Sample C Male 19.3
Sample D Male 21.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 17.4
Sample A Male 18.6
Sample B Male 19.2
Sample C Female 17.4
Sample D Female 19.1
Hippocampal formation
nTPM: 17.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 15.5
Sample A Male 22.9
Sample B Male 16.6
Sample C Female 16.3
Sample D Female 15.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
70429178 Antisense, RP_050614_01_B08, Mouse strain C57BL/6J (56 days, male) 4.0

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