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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.8
nTPM
Monaco:
423.5
nTPM
Schmiedel:
834.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.8
HPA sample
nTPM
gdT-cell nTPM: 45.9
Samples: 6
Max nTPM: 55.1
Min nTPM: 36.7
P10809_1007
43.7
P10809_1022
46.4
P10809_1041
55.1
P10809_1060
36.7
P10809_1077
41.7
P10809_1098
51.8
MAIT T-cell nTPM: 79.8
Samples: 6
Max nTPM: 101.5
Min nTPM: 56.0
P10809_1006
82.7
P10809_1024
56.0
P10809_1043
81.6
P10809_1062
101.5
P10809_1083
75.3
P10809_1097
81.6
Memory CD4 T-cell nTPM: 46.3
Samples: 6
Max nTPM: 51.5
Min nTPM: 38.6
P10809_1014
50.5
P10809_1026
45.2
P10809_1045
51.3
P10809_1064
40.9
P10809_1086
38.6
P10809_1113
51.5
Memory CD8 T-cell nTPM: 36.1
Samples: 5
Max nTPM: 47.0
Min nTPM: 29.3
P10809_1012
38.5
P10809_1027
29.3
P10809_1046
47.0
P10809_1065
33.1
P10809_1111
32.5
Naive CD4 T-cell nTPM: 37.9
Samples: 6
Max nTPM: 45.5
Min nTPM: 30.8
P10809_1015
33.8
P10809_1030
30.8
P10809_1049
40.2
P10809_1068
45.5
P10809_1085
37.1
P10809_1112
40.0
Naive CD8 T-cell nTPM: 39.9
Samples: 6
Max nTPM: 46.0
Min nTPM: 31.8
P10809_1016
46.0
P10809_1031
37.3
P10809_1050
42.8
P10809_1069
41.3
P10809_1087
31.8
P10809_1110
40.0
T-reg nTPM: 63.3
Samples: 6
Max nTPM: 80.0
Min nTPM: 46.2
P10809_1018
76.0
P10809_1037
46.2
P10809_1056
80.0
P10809_1075
58.8
P10809_1094
64.0
P10809_1106
54.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
423.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 228.3
Samples: 4
Max nTPM: 275.3
Min nTPM: 181.3
RHH5202_R3573
275.3
RHH5230_R3602
248.9
RHH5259_R3631
181.3
RHH5288_R3660
207.7
Effector memory CD8 T-cell nTPM: 175.3
Samples: 4
Max nTPM: 219.2
Min nTPM: 125.6
RHH5203_R3574
219.2
RHH5231_R3603
208.0
RHH5260_R3632
148.3
RHH5289_R3661
125.6
MAIT T-cell nTPM: 423.5
Samples: 4
Max nTPM: 570.2
Min nTPM: 296.4
RHH5233_R3605
470.2
RHH5205_R3576
570.2
RHH5262_R3634
296.4
RHH5297_R3663
357.0
Memory CD4 T-cell TFH nTPM: 258.3
Samples: 4
Max nTPM: 342.8
Min nTPM: 178.6
RHH5300_R3666
258.1
RHH5236_R3608
178.6
RHH5265_R3637
253.5
RHH5208_R3579
342.8
Memory CD4 T-cell Th1 nTPM: 235.9
Samples: 4
Max nTPM: 303.9
Min nTPM: 173.3
RHH5210_R3581
270.0
RHH5302_R3668
196.5
RHH5238_R3610
303.9
RHH5267_R3639
173.3
Memory CD4 T-cell Th1/Th17 nTPM: 287.1
Samples: 4
Max nTPM: 341.8
Min nTPM: 231.7
RHH5303_R3669
248.9
RHH5211_R3582
341.8
RHH5239_R3611
325.8
RHH5268_R3640
231.7
Memory CD4 T-cell Th17 nTPM: 341.6
Samples: 4
Max nTPM: 386.3
Min nTPM: 270.0
RHH5304_R3670
326.0
RHH5212_R3583
386.3
RHH5240_R3612
384.2
RHH5269_R3641
270.0
Memory CD4 T-cell Th2 nTPM: 213.7
Samples: 4
Max nTPM: 251.5
Min nTPM: 194.7
RHH5305_R3671
194.7
RHH5213_R3584
251.5
RHH5241_R3613
210.9
RHH5270_R3642
197.7
Naive CD4 T-cell nTPM: 214.0
Samples: 4
Max nTPM: 264.8
Min nTPM: 176.1
RHH5306_R3672
210.3
RHH5214_R3585
176.1
RHH5242_R3614
264.8
RHH5271_R3643
204.9
Naive CD8 T-cell nTPM: 248.6
Samples: 4
Max nTPM: 333.0
Min nTPM: 196.6
RHH5201_R3572
221.7
RHH5229_R3601
333.0
RHH5258_R3630
196.6
RHH5287_R3659
243.1
Non-Vd2 gdTCR nTPM: 144.5
Samples: 4
Max nTPM: 230.8
Min nTPM: 79.3
RHH5235_R3607
230.8
RHH5264_R3636
83.7
RHH5207_R3578
184.3
RHH5299_R3665
79.3
T-reg nTPM: 221.3
Samples: 4
Max nTPM: 241.6
Min nTPM: 181.2
RHH5301_R3667
241.6
RHH5237_R3609
181.2
RHH5266_R3638
222.8
RHH5209_R3580
239.5
Terminal effector memory CD4 T-cell nTPM: 184.5
Samples: 2
Max nTPM: 267.5
Min nTPM: 101.4
RHH5243_R3615
267.5
RHH5272_R3644
101.4
Terminal effector memory CD8 T-cell nTPM: 155.6
Samples: 4
Max nTPM: 228.4
Min nTPM: 85.3
RHH5232_R3604
228.4
RHH5204_R3575
163.8
RHH5261_R3633
85.3
RHH5296_R3662
144.8
Vd2 gdTCR nTPM: 300.1
Samples: 4
Max nTPM: 437.0
Min nTPM: 226.8
RHH5234_R3606
286.7
RHH5206_R3577
437.0
RHH5263_R3635
249.9
RHH5298_R3664
226.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
