HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:127.3 nTPM
HPA Brain:106.6 nTPM
GTEx:127.3 nTPM
FANTOM5:187.3 Scaled Tags Per Million
Pig:57.3 nTPM
Mouse:31.4 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.6
Sample id Sample description nTPM
Hippocampus
nTPM: 86.8
1911 Female, age 85, right hemisphere 98.7
2529 Female, age 94, left hemisphere 94.6
1855 Male, age 76, left hemisphere 88.3
1898 Male, age 80, left hemisphere 87.0
2621 Female, age 67, right hemisphere 83.6
2148 Female, age 91, left hemisphere 68.4
Dentate gyrus
nTPM: 76.2
2010 Male, age 76, both hemispheres 104.7
2530 Female, age 94, left hemisphere 88.2
2528 Male, age 74, both hemispheres 87.5
2246 Female, age 85, both hemispheres 72.3
2531 Female, age 67, both hemispheres 52.5
1927 Female, age 91, both hemispheres 51.9
Entorhinal gyrus
nTPM: 83.3
2117 Female, age 91, right hemisphere 136.7
2764 Male, age 80, right hemisphere 84.3
1787 Male, age 76, left hemisphere 82.6
1938 Female, age 85, left hemisphere 76.9
2686 Male, age 75, right hemisphere 68.0
2613 Female, age 94, left hemisphere 51.5
Hippocampus, CA1
nTPM: 71.8
2527 Male, age 74, both hemispheres 85.8
2082 Female, age 91, right hemisphere 74.7
1873 Female, age 85, both hemispheres 71.2
2749 Male, age 80, left hemisphere 68.5
2045 Male, age 76, both hemispheres 58.7
Hippocampus, CA2
nTPM: 82.5
2249 Male, age 74, both hemispheres 104.7
1963 Male, age 80, left hemisphere 97.8
2113 Female, age 91, right hemisphere 80.9
1940 Female, age 85, left hemisphere 78.0
2437 Female, age 94, left hemisphere 74.5
1892 Male, age 76, both hemispheres 59.1
Hippocampus, CA3
nTPM: 63.6
1891 Female, age 85, both hemispheres 99.1
1867 Male, age 76, both hemispheres 81.5
2436 Male, age 74, both hemispheres 75.8
2137 Male, age 80, left hemisphere 45.3
2620 Female, age 94, left hemisphere 42.8
2861 Female, age 67, both hemispheres 37.1
Parahippocampal cortex
nTPM: 71.8
2018 Male, age 76, both hemispheres 94.9
2692 Male, age 74, both hemispheres 89.1
2532 Female, age 72, left hemisphere 86.5
1990 Female, age 91, right hemisphere 77.1
1850 Male, age 80, both hemispheres 69.1
1933 Female, age 85, both hemispheres 69.1
2245 Female, age 91, both hemispheres 65.6
2693 Female, age 94, both hemispheres 59.5
2250 Female, age 67, right hemisphere 57.4
2622 Female, age 67, right hemisphere 49.9
Perirhinal gyrus
nTPM: 56.7
2521 Female, age 94, right hemisphere 63.0
2848 Male, age 76, right hemisphere 59.8
1847 Female, age 91, left hemisphere 58.1
1794 Male, age 80, right hemisphere 55.8
1841 Female, age 85, right hemisphere 46.8
Subiculum
nTPM: 106.6
2042 Male, age 76, both hemispheres 154.8
1901 Male, age 80, both hemispheres 120.6
2438 Female, age 94, left hemisphere 96.2
2619 Male, age 74, both hemispheres 94.6
1977 Female, age 85, both hemispheres 90.8
2729 Female, age 91, right hemisphere 82.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.3
Samples: 197

Max nTPM: 349.0
Min nTPM: 25.7
Std nTPM: 61.6
Median nTPM: 114.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 349.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 305.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 303.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 292.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 271.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 260.9
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 257.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 255.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 246.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 244.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 237.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 187.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 187.3
FF:10153-102I9 76 years, female 215.7
FF:10169-103B7 60 years, female 158.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.3
Pig sample Sample description nTPM
Subiculum
nTPM: 41.3
Samples: 4

Max nTPM: 44.8
Min nTPM: 36.3
Sample A Female 44.8
Sample B Female 43.5
Sample C Male 36.3
Sample D Male 40.7
Dorsal hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 89.0
Min nTPM: 28.8
Sample A Female 66.0
Sample B Female 45.7
Sample C Male 89.0
Sample D Male 28.8
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 34.3
Min nTPM: 24.3
Sample A Female 32.7
Sample B Female 34.3
Sample C Male 31.2
Sample D Male 24.3
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 58.5
Min nTPM: 32.5
Sample A Female 44.3
Sample B Female 32.5
Sample C Male 58.5
Sample D Male 56.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.4
Samples: 4

Max nTPM: 35.4
Min nTPM: 25.6
Sample A Male 35.4
Sample B Male 31.6
Sample C Female 32.8
Sample D Female 25.6
Hippocampal formation
nTPM: 27.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 25.1
Sample A Male 28.5
Sample B Male 26.6
Sample C Female 25.1
Sample D Female 29.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69117356 Antisense, RP_050330_01_A02, Mouse strain C57BL/6J (56 days, male) 0.7
826 Antisense, RP_040315_01_17, Mouse strain C57BL/6J (56 days, male) 0.4
825 Antisense, RP_040315_01_17, Mouse strain C57BL/6J (56 days, male) 0.1

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