HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:18.0 nTPM
HPA Brain:27.1 nTPM
GTEx:18.0 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:26.4 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038955
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.1
Sample id Sample description nTPM
Hippocampus
nTPM: 22.3
2621 Female, age 67, right hemisphere 25.3
1855 Male, age 76, left hemisphere 23.5
2529 Female, age 94, left hemisphere 23.4
1898 Male, age 80, left hemisphere 22.6
1911 Female, age 85, right hemisphere 19.8
2148 Female, age 91, left hemisphere 19.4
Dentate gyrus
nTPM: 20.1
2530 Female, age 94, left hemisphere 24.2
2010 Male, age 76, both hemispheres 20.9
1927 Female, age 91, both hemispheres 20.6
2531 Female, age 67, both hemispheres 20.1
2246 Female, age 85, both hemispheres 18.7
2528 Male, age 74, both hemispheres 15.7
Entorhinal gyrus
nTPM: 27.1
1938 Female, age 85, left hemisphere 30.0
2764 Male, age 80, right hemisphere 29.2
1787 Male, age 76, left hemisphere 29.0
2613 Female, age 94, left hemisphere 26.9
2686 Male, age 75, right hemisphere 24.6
2117 Female, age 91, right hemisphere 22.9
Hippocampus, CA1
nTPM: 20.7
1873 Female, age 85, both hemispheres 22.9
2749 Male, age 80, left hemisphere 22.7
2045 Male, age 76, both hemispheres 22.2
2527 Male, age 74, both hemispheres 19.7
2082 Female, age 91, right hemisphere 16.0
Hippocampus, CA2
nTPM: 19.9
1892 Male, age 76, both hemispheres 24.2
2437 Female, age 94, left hemisphere 21.1
1940 Female, age 85, left hemisphere 20.9
1963 Male, age 80, left hemisphere 19.3
2113 Female, age 91, right hemisphere 17.0
2249 Male, age 74, both hemispheres 16.7
Hippocampus, CA3
nTPM: 22.2
1867 Male, age 76, both hemispheres 26.0
2861 Female, age 67, both hemispheres 26.0
2620 Female, age 94, left hemisphere 24.6
1891 Female, age 85, both hemispheres 21.3
2137 Male, age 80, left hemisphere 20.8
2436 Male, age 74, both hemispheres 14.5
Parahippocampal cortex
nTPM: 23.2
1850 Male, age 80, both hemispheres 26.2
2622 Female, age 67, right hemisphere 26.0
2532 Female, age 72, left hemisphere 25.8
1933 Female, age 85, both hemispheres 24.5
1990 Female, age 91, right hemisphere 24.0
2245 Female, age 91, both hemispheres 22.1
2692 Male, age 74, both hemispheres 21.7
2250 Female, age 67, right hemisphere 21.2
2693 Female, age 94, both hemispheres 20.1
2018 Male, age 76, both hemispheres 20.0
Perirhinal gyrus
nTPM: 25.1
1794 Male, age 80, right hemisphere 27.8
1847 Female, age 91, left hemisphere 26.8
2848 Male, age 76, right hemisphere 26.3
1841 Female, age 85, right hemisphere 25.3
2521 Female, age 94, right hemisphere 19.1
Subiculum
nTPM: 22.8
2438 Female, age 94, left hemisphere 25.2
1977 Female, age 85, both hemispheres 24.8
2042 Male, age 76, both hemispheres 24.7
1901 Male, age 80, both hemispheres 23.7
2619 Male, age 74, both hemispheres 21.0
2729 Female, age 91, right hemisphere 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 33.0
Min nTPM: 11.1
Std nTPM: 3.1
Median nTPM: 17.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 26.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 25.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.7
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 24.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 23.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 23.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 22.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10153-102I9 76 years, female 20.8
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.8
Sample A Female 7.8
Sample B Female 8.1
Sample C Male 9.1
Sample D Male 8.4
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.5
Sample A Female 10.1
Sample B Female 9.5
Sample C Male 9.6
Sample D Male 10.2
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 8.6
Min nTPM: 8.0
Sample A Female 8.6
Sample B Female 8.6
Sample C Male 8.0
Sample D Male 8.3
Ventral hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.8
Sample A Female 8.8
Sample B Female 8.8
Sample C Male 10.9
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 24.4
Min nTPM: 22.5
Sample A Male 24.4
Sample B Male 23.7
Sample C Female 23.9
Sample D Female 22.5
Hippocampal formation
nTPM: 26.4
Samples: 4

Max nTPM: 29.9
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 26.0
Sample C Female 29.9
Sample D Female 27.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
583543 Antisense, RP_040831_02_F09, Mouse strain C57BL/6J (56 days, male) 7.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org