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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.4
nTPM
Monaco:
191.5
nTPM
Schmiedel:
111.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.4
HPA sample
nTPM
gdT-cell nTPM: 42.3
Samples: 6
Max nTPM: 51.3
Min nTPM: 36.1
P10809_1007
50.9
P10809_1022
51.3
P10809_1041
36.8
P10809_1060
38.6
P10809_1077
36.1
P10809_1098
40.1
MAIT T-cell nTPM: 63.4
Samples: 6
Max nTPM: 81.3
Min nTPM: 45.6
P10809_1006
81.3
P10809_1024
72.5
P10809_1043
50.3
P10809_1062
66.3
P10809_1083
45.6
P10809_1097
64.2
Memory CD4 T-cell nTPM: 53.1
Samples: 6
Max nTPM: 61.5
Min nTPM: 43.4
P10809_1014
57.4
P10809_1026
53.2
P10809_1045
61.5
P10809_1064
47.5
P10809_1086
43.4
P10809_1113
55.7
Memory CD8 T-cell nTPM: 52.0
Samples: 5
Max nTPM: 63.1
Min nTPM: 34.6
P10809_1012
63.1
P10809_1027
58.7
P10809_1046
54.3
P10809_1065
34.6
P10809_1111
49.2
Naive CD4 T-cell nTPM: 52.6
Samples: 6
Max nTPM: 63.5
Min nTPM: 41.4
P10809_1015
63.5
P10809_1030
45.4
P10809_1049
49.0
P10809_1068
61.7
P10809_1085
41.4
P10809_1112
54.6
Naive CD8 T-cell nTPM: 49.3
Samples: 6
Max nTPM: 67.9
Min nTPM: 35.6
P10809_1016
67.9
P10809_1031
56.9
P10809_1050
42.6
P10809_1069
40.7
P10809_1087
35.6
P10809_1110
52.1
T-reg nTPM: 42.5
Samples: 6
Max nTPM: 57.2
Min nTPM: 33.1
P10809_1018
57.2
P10809_1037
34.6
P10809_1056
47.1
P10809_1075
36.1
P10809_1094
46.9
P10809_1106
33.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
191.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 138.1
Samples: 4
Max nTPM: 170.5
Min nTPM: 86.6
RHH5202_R3573
156.5
RHH5230_R3602
138.6
RHH5259_R3631
86.6
RHH5288_R3660
170.5
Effector memory CD8 T-cell nTPM: 139.2
Samples: 4
Max nTPM: 186.5
Min nTPM: 98.2
RHH5203_R3574
186.5
RHH5231_R3603
115.6
RHH5260_R3632
98.2
RHH5289_R3661
156.4
MAIT T-cell nTPM: 191.5
Samples: 4
Max nTPM: 206.8
Min nTPM: 175.9
RHH5233_R3605
192.5
RHH5205_R3576
175.9
RHH5262_R3634
190.8
RHH5297_R3663
206.8
Memory CD4 T-cell TFH nTPM: 147.6
Samples: 4
Max nTPM: 179.1
Min nTPM: 107.3
RHH5300_R3666
179.1
RHH5236_R3608
107.3
RHH5265_R3637
146.3
RHH5208_R3579
157.8
Memory CD4 T-cell Th1 nTPM: 161.7
Samples: 4
Max nTPM: 224.2
Min nTPM: 101.2
RHH5210_R3581
184.3
RHH5302_R3668
224.2
RHH5238_R3610
101.2
RHH5267_R3639
137.0
Memory CD4 T-cell Th1/Th17 nTPM: 166.8
Samples: 4
Max nTPM: 227.1
Min nTPM: 117.9
RHH5303_R3669
227.1
RHH5211_R3582
178.0
RHH5239_R3611
117.9
RHH5268_R3640
144.2
Memory CD4 T-cell Th17 nTPM: 160.3
Samples: 4
Max nTPM: 215.5
Min nTPM: 123.6
RHH5304_R3670
215.5
RHH5212_R3583
156.3
RHH5240_R3612
123.6
RHH5269_R3641
145.8
Memory CD4 T-cell Th2 nTPM: 191.1
Samples: 4
Max nTPM: 221.0
Min nTPM: 154.4
RHH5305_R3671
221.0
RHH5213_R3584
193.4
RHH5241_R3613
195.4
RHH5270_R3642
154.4
Naive CD4 T-cell nTPM: 171.1
Samples: 4
Max nTPM: 239.1
Min nTPM: 134.8
RHH5306_R3672
239.1
RHH5214_R3585
134.8
RHH5242_R3614
163.4
RHH5271_R3643
147.2
Naive CD8 T-cell nTPM: 125.5
Samples: 4
Max nTPM: 176.0
Min nTPM: 70.1
RHH5201_R3572
176.0
RHH5229_R3601
70.1
RHH5258_R3630
119.9
RHH5287_R3659
136.1
Non-Vd2 gdTCR nTPM: 143.3
Samples: 4
Max nTPM: 177.0
Min nTPM: 121.9
RHH5235_R3607
129.0
RHH5264_R3636
121.9
RHH5207_R3578
145.4
RHH5299_R3665
177.0
T-reg nTPM: 134.4
Samples: 4
Max nTPM: 158.0
Min nTPM: 116.2
RHH5301_R3667
158.0
RHH5237_R3609
116.2
RHH5266_R3638
127.5
RHH5209_R3580
136.0
Terminal effector memory CD4 T-cell nTPM: 149.1
Samples: 2
Max nTPM: 158.8
Min nTPM: 139.4
RHH5243_R3615
139.4
RHH5272_R3644
158.8
Terminal effector memory CD8 T-cell nTPM: 157.8
Samples: 4
Max nTPM: 197.9
Min nTPM: 75.7
RHH5232_R3604
197.9
RHH5204_R3575
169.9
RHH5261_R3633
75.7
RHH5296_R3662
187.5
Vd2 gdTCR nTPM: 155.9
Samples: 4
Max nTPM: 198.0
Min nTPM: 110.2
RHH5234_R3606
169.2
RHH5206_R3577
146.2
RHH5263_R3635
110.2
RHH5298_R3664
198.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
