HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.6 nTPM
HPA Brain:28.9 nTPM
GTEx:29.6 nTPM
FANTOM5:47.9 Scaled Tags Per Million
Pig:28.6 nTPM
Mouse:60.3 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035530Antibody HPA035531
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1898 Male, age 80, left hemisphere 30.1
1855 Male, age 76, left hemisphere 28.0
2529 Female, age 94, left hemisphere 28.0
2148 Female, age 91, left hemisphere 27.9
2621 Female, age 67, right hemisphere 27.0
1911 Female, age 85, right hemisphere 24.5
Dentate gyrus
nTPM: 26.8
2530 Female, age 94, left hemisphere 29.6
2246 Female, age 85, both hemispheres 27.8
2010 Male, age 76, both hemispheres 27.2
2531 Female, age 67, both hemispheres 25.8
2528 Male, age 74, both hemispheres 25.5
1927 Female, age 91, both hemispheres 24.6
Entorhinal gyrus
nTPM: 27.5
1787 Male, age 76, left hemisphere 29.4
1938 Female, age 85, left hemisphere 27.9
2613 Female, age 94, left hemisphere 27.9
2764 Male, age 80, right hemisphere 27.9
2117 Female, age 91, right hemisphere 27.6
2686 Male, age 75, right hemisphere 24.2
Hippocampus, CA1
nTPM: 27.3
2749 Male, age 80, left hemisphere 33.6
2527 Male, age 74, both hemispheres 27.0
1873 Female, age 85, both hemispheres 26.5
2045 Male, age 76, both hemispheres 26.3
2082 Female, age 91, right hemisphere 22.9
Hippocampus, CA2
nTPM: 27.7
1963 Male, age 80, left hemisphere 30.2
1892 Male, age 76, both hemispheres 29.7
2249 Male, age 74, both hemispheres 27.3
1940 Female, age 85, left hemisphere 27.2
2113 Female, age 91, right hemisphere 26.3
2437 Female, age 94, left hemisphere 25.5
Hippocampus, CA3
nTPM: 27.6
2137 Male, age 80, left hemisphere 32.2
2620 Female, age 94, left hemisphere 27.3
1867 Male, age 76, both hemispheres 26.9
2436 Male, age 74, both hemispheres 26.6
1891 Female, age 85, both hemispheres 26.5
2861 Female, age 67, both hemispheres 25.9
Parahippocampal cortex
nTPM: 26.3
2532 Female, age 72, left hemisphere 29.9
1933 Female, age 85, both hemispheres 28.5
2245 Female, age 91, both hemispheres 28.4
1850 Male, age 80, both hemispheres 27.7
2250 Female, age 67, right hemisphere 27.3
2018 Male, age 76, both hemispheres 26.8
2622 Female, age 67, right hemisphere 26.2
1990 Female, age 91, right hemisphere 25.8
2693 Female, age 94, both hemispheres 22.4
2692 Male, age 74, both hemispheres 20.5
Perirhinal gyrus
nTPM: 28.9
1794 Male, age 80, right hemisphere 31.1
1847 Female, age 91, left hemisphere 29.5
1841 Female, age 85, right hemisphere 29.4
2521 Female, age 94, right hemisphere 27.4
2848 Male, age 76, right hemisphere 27.0
Subiculum
nTPM: 25.8
1977 Female, age 85, both hemispheres 29.9
1901 Male, age 80, both hemispheres 27.8
2042 Male, age 76, both hemispheres 25.7
2619 Male, age 74, both hemispheres 25.5
2729 Female, age 91, right hemisphere 23.1
2438 Female, age 94, left hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 43.8
Min nTPM: 19.3
Std nTPM: 4.3
Median nTPM: 29.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 43.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 40.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 38.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 38.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 38.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 37.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 37.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 37.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 37.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.9
FF:10153-102I9 76 years, female 52.2
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.6
Pig sample Sample description nTPM
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 31.9
Min nTPM: 22.7
Sample A Female 31.9
Sample B Female 22.7
Sample C Male 24.7
Sample D Male 23.3
Dorsal hippocampus
nTPM: 28.6
Samples: 4

Max nTPM: 33.1
Min nTPM: 25.4
Sample A Female 33.1
Sample B Female 30.1
Sample C Male 25.9
Sample D Male 25.4
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 30.0
Min nTPM: 23.0
Sample A Female 30.0
Sample B Female 26.0
Sample C Male 25.7
Sample D Male 23.0
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 20.0
Sample A Female 26.9
Sample B Female 20.0
Sample C Male 31.7
Sample D Male 27.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.3
Samples: 4

Max nTPM: 65.2
Min nTPM: 57.0
Sample A Male 57.0
Sample B Male 57.0
Sample C Female 58.1
Sample D Female 65.2
Hippocampal formation
nTPM: 60.3
Samples: 4

Max nTPM: 66.0
Min nTPM: 55.9
Sample A Male 59.1
Sample B Male 60.3
Sample C Female 66.0
Sample D Female 55.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
2499 Antisense, RP_040407_02_G06, Mouse strain C57BL/6J (56 days, male) 9.6
2500 Antisense, RP_040407_02_G06, Mouse strain C57BL/6J (56 days, male) 3.9

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