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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
121.8
nTPM
Monaco:
85.2
nTPM
Schmiedel:
76.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.8
HPA sample
nTPM
gdT-cell nTPM: 64.8
Samples: 6
Max nTPM: 79.6
Min nTPM: 44.6
P10809_1007
44.6
P10809_1022
65.2
P10809_1041
79.6
P10809_1060
68.0
P10809_1077
69.7
P10809_1098
61.4
MAIT T-cell nTPM: 68.5
Samples: 6
Max nTPM: 76.9
Min nTPM: 46.9
P10809_1006
46.9
P10809_1024
73.2
P10809_1043
76.9
P10809_1062
66.5
P10809_1083
75.3
P10809_1097
72.1
Memory CD4 T-cell nTPM: 76.8
Samples: 6
Max nTPM: 91.5
Min nTPM: 53.5
P10809_1014
53.5
P10809_1026
70.3
P10809_1045
83.7
P10809_1064
91.5
P10809_1086
79.0
P10809_1113
82.6
Memory CD8 T-cell nTPM: 77.2
Samples: 5
Max nTPM: 83.8
Min nTPM: 61.4
P10809_1012
61.4
P10809_1027
74.7
P10809_1046
83.8
P10809_1065
82.4
P10809_1111
83.5
Naive CD4 T-cell nTPM: 58.7
Samples: 6
Max nTPM: 68.4
Min nTPM: 43.6
P10809_1015
43.6
P10809_1030
53.4
P10809_1049
68.4
P10809_1068
62.4
P10809_1085
61.9
P10809_1112
62.5
Naive CD8 T-cell nTPM: 67.9
Samples: 6
Max nTPM: 87.3
Min nTPM: 39.0
P10809_1016
39.0
P10809_1031
81.1
P10809_1050
57.8
P10809_1069
87.3
P10809_1087
81.8
P10809_1110
60.2
T-reg nTPM: 121.8
Samples: 6
Max nTPM: 183.3
Min nTPM: 70.6
P10809_1018
70.6
P10809_1037
147.4
P10809_1056
183.3
P10809_1075
87.5
P10809_1094
113.5
P10809_1106
128.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.4
Samples: 4
Max nTPM: 85.8
Min nTPM: 58.1
RHH5202_R3573
76.4
RHH5230_R3602
65.4
RHH5259_R3631
58.1
RHH5288_R3660
85.8
Effector memory CD8 T-cell nTPM: 70.3
Samples: 4
Max nTPM: 108.4
Min nTPM: 43.2
RHH5203_R3574
108.4
RHH5231_R3603
49.0
RHH5260_R3632
43.2
RHH5289_R3661
80.5
MAIT T-cell nTPM: 57.9
Samples: 4
Max nTPM: 68.4
Min nTPM: 51.9
RHH5233_R3605
68.4
RHH5205_R3576
51.9
RHH5262_R3634
53.6
RHH5297_R3663
57.7
Memory CD4 T-cell TFH nTPM: 85.2
Samples: 4
Max nTPM: 90.2
Min nTPM: 75.6
RHH5300_R3666
88.2
RHH5236_R3608
90.2
RHH5265_R3637
75.6
RHH5208_R3579
86.7
Memory CD4 T-cell Th1 nTPM: 74.1
Samples: 4
Max nTPM: 95.8
Min nTPM: 55.6
RHH5210_R3581
81.0
RHH5302_R3668
95.8
RHH5238_R3610
63.8
RHH5267_R3639
55.6
Memory CD4 T-cell Th1/Th17 nTPM: 65.5
Samples: 4
Max nTPM: 89.4
Min nTPM: 40.1
RHH5303_R3669
89.4
RHH5211_R3582
84.4
RHH5239_R3611
40.1
RHH5268_R3640
47.9
Memory CD4 T-cell Th17 nTPM: 45.3
Samples: 4
Max nTPM: 68.5
Min nTPM: 29.4
RHH5304_R3670
45.5
RHH5212_R3583
68.5
RHH5240_R3612
37.9
RHH5269_R3641
29.4
Memory CD4 T-cell Th2 nTPM: 68.1
Samples: 4
Max nTPM: 79.5
Min nTPM: 51.0
RHH5305_R3671
63.8
RHH5213_R3584
78.2
RHH5241_R3613
79.5
RHH5270_R3642
51.0
Naive CD4 T-cell nTPM: 56.8
Samples: 4
Max nTPM: 72.0
Min nTPM: 38.6
RHH5306_R3672
48.4
RHH5214_R3585
68.1
RHH5242_R3614
72.0
RHH5271_R3643
38.6
Naive CD8 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 75.6
Min nTPM: 24.3
RHH5201_R3572
59.1
RHH5229_R3601
24.3
RHH5258_R3630
75.6
RHH5287_R3659
55.9
Non-Vd2 gdTCR nTPM: 67.4
Samples: 4
Max nTPM: 87.2
Min nTPM: 57.0
RHH5235_R3607
61.9
RHH5264_R3636
57.0
RHH5207_R3578
63.6
RHH5299_R3665
87.2
T-reg nTPM: 76.8
Samples: 4
Max nTPM: 104.2
Min nTPM: 45.5
RHH5301_R3667
95.9
RHH5237_R3609
104.2
RHH5266_R3638
45.5
RHH5209_R3580
61.4
Terminal effector memory CD4 T-cell nTPM: 68.7
Samples: 2
Max nTPM: 95.5
Min nTPM: 41.9
RHH5243_R3615
41.9
RHH5272_R3644
95.5
Terminal effector memory CD8 T-cell nTPM: 68.4
Samples: 4
Max nTPM: 85.3
Min nTPM: 41.8
RHH5232_R3604
85.3
RHH5204_R3575
77.0
RHH5261_R3633
41.8
RHH5296_R3662
69.3
Vd2 gdTCR nTPM: 66.2
Samples: 4
Max nTPM: 78.9
Min nTPM: 56.2
RHH5234_R3606
58.8
RHH5206_R3577
78.9
RHH5263_R3635
56.2
RHH5298_R3664
70.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
