HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:71.4 nTPM
HPA Brain:140.5 nTPM
GTEx:71.4 nTPM
FANTOM5:160.1 Scaled Tags Per Million
Pig:114.5 nTPM
Mouse:17.7 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047735
Glial cells High
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 140.5
Sample id Sample description nTPM
Hippocampus
nTPM: 140.5
1855 Male, age 76, left hemisphere 186.2
1898 Male, age 80, left hemisphere 158.1
2529 Female, age 94, left hemisphere 134.6
2148 Female, age 91, left hemisphere 130.8
1911 Female, age 85, right hemisphere 129.7
2621 Female, age 67, right hemisphere 103.7
Dentate gyrus
nTPM: 121.5
2530 Female, age 94, left hemisphere 165.5
2010 Male, age 76, both hemispheres 155.9
2528 Male, age 74, both hemispheres 147.4
2246 Female, age 85, both hemispheres 107.0
2531 Female, age 67, both hemispheres 79.1
1927 Female, age 91, both hemispheres 73.9
Entorhinal gyrus
nTPM: 114.8
2117 Female, age 91, right hemisphere 227.0
1787 Male, age 76, left hemisphere 131.2
2764 Male, age 80, right hemisphere 104.2
2686 Male, age 75, right hemisphere 90.9
1938 Female, age 85, left hemisphere 84.4
2613 Female, age 94, left hemisphere 51.3
Hippocampus, CA1
nTPM: 105.2
2527 Male, age 74, both hemispheres 113.0
2045 Male, age 76, both hemispheres 112.3
1873 Female, age 85, both hemispheres 111.8
2082 Female, age 91, right hemisphere 98.8
2749 Male, age 80, left hemisphere 90.1
Hippocampus, CA2
nTPM: 118.2
1963 Male, age 80, left hemisphere 134.2
1940 Female, age 85, left hemisphere 132.0
2249 Male, age 74, both hemispheres 127.1
1892 Male, age 76, both hemispheres 106.9
2113 Female, age 91, right hemisphere 104.9
2437 Female, age 94, left hemisphere 104.2
Hippocampus, CA3
nTPM: 98.1
1867 Male, age 76, both hemispheres 127.9
1891 Female, age 85, both hemispheres 126.4
2620 Female, age 94, left hemisphere 101.5
2436 Male, age 74, both hemispheres 81.4
2137 Male, age 80, left hemisphere 78.3
2861 Female, age 67, both hemispheres 72.9
Parahippocampal cortex
nTPM: 92.5
2018 Male, age 76, both hemispheres 141.9
2692 Male, age 74, both hemispheres 100.9
2532 Female, age 72, left hemisphere 97.4
2245 Female, age 91, both hemispheres 96.5
1850 Male, age 80, both hemispheres 89.4
1990 Female, age 91, right hemisphere 88.5
1933 Female, age 85, both hemispheres 86.4
2693 Female, age 94, both hemispheres 77.5
2250 Female, age 67, right hemisphere 74.9
2622 Female, age 67, right hemisphere 72.0
Perirhinal gyrus
nTPM: 73.9
2848 Male, age 76, right hemisphere 98.6
1794 Male, age 80, right hemisphere 92.6
1841 Female, age 85, right hemisphere 61.8
2521 Female, age 94, right hemisphere 59.2
1847 Female, age 91, left hemisphere 57.5
Subiculum
nTPM: 138.8
2042 Male, age 76, both hemispheres 215.5
2729 Female, age 91, right hemisphere 182.7
1901 Male, age 80, both hemispheres 141.7
1977 Female, age 85, both hemispheres 106.7
2619 Male, age 74, both hemispheres 102.5
2438 Female, age 94, left hemisphere 83.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.4
Samples: 197

Max nTPM: 201.2
Min nTPM: 14.6
Std nTPM: 33.1
Median nTPM: 66.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 201.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 193.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 181.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 163.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 153.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 152.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 152.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 146.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 144.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 140.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 139.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 160.1
FF:10153-102I9 76 years, female 165.5
FF:10169-103B7 60 years, female 154.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 114.5
Pig sample Sample description nTPM
Subiculum
nTPM: 56.9
Samples: 4

Max nTPM: 70.5
Min nTPM: 48.4
Sample A Female 70.5
Sample B Female 58.4
Sample C Male 48.4
Sample D Male 50.1
Dorsal hippocampus
nTPM: 114.6
Samples: 4

Max nTPM: 170.7
Min nTPM: 41.9
Sample A Female 164.4
Sample B Female 81.2
Sample C Male 170.7
Sample D Male 41.9
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 57.9
Min nTPM: 40.4
Sample A Female 50.8
Sample B Female 57.9
Sample C Male 40.4
Sample D Male 48.3
Ventral hippocampus
nTPM: 83.8
Samples: 4

Max nTPM: 101.7
Min nTPM: 45.0
Sample A Female 101.7
Sample B Female 45.0
Sample C Male 88.3
Sample D Male 100.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.8
Sample A Male 15.0
Sample B Male 11.4
Sample C Female 11.8
Sample D Female 10.8
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 13.4
Sample A Male 13.4
Sample B Male 16.7
Sample C Female 23.4
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69013438 Antisense, RP_050309_02_D07, Mouse strain C57BL/6J (56 days, male) 1.3

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