HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.1 nTPM
HPA Brain:25.5 nTPM
GTEx:18.1 nTPM
FANTOM5:20.9 Scaled Tags Per Million
Pig:34.5 nTPM
Mouse:35.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.5
Sample id Sample description nTPM
Hippocampus
nTPM: 23.3
1898 Male, age 80, left hemisphere 27.0
2529 Female, age 94, left hemisphere 24.9
2621 Female, age 67, right hemisphere 23.5
1855 Male, age 76, left hemisphere 22.2
2148 Female, age 91, left hemisphere 21.6
1911 Female, age 85, right hemisphere 20.3
Dentate gyrus
nTPM: 21.5
2528 Male, age 74, both hemispheres 23.3
1927 Female, age 91, both hemispheres 22.8
2010 Male, age 76, both hemispheres 22.7
2246 Female, age 85, both hemispheres 22.7
2531 Female, age 67, both hemispheres 19.1
2530 Female, age 94, left hemisphere 18.5
Entorhinal gyrus
nTPM: 21.3
2117 Female, age 91, right hemisphere 25.1
1787 Male, age 76, left hemisphere 23.8
1938 Female, age 85, left hemisphere 23.8
2764 Male, age 80, right hemisphere 20.5
2686 Male, age 75, right hemisphere 17.3
2613 Female, age 94, left hemisphere 17.1
Hippocampus, CA1
nTPM: 22.9
2527 Male, age 74, both hemispheres 24.4
1873 Female, age 85, both hemispheres 23.4
2082 Female, age 91, right hemisphere 22.5
2749 Male, age 80, left hemisphere 22.3
2045 Male, age 76, both hemispheres 21.8
Hippocampus, CA2
nTPM: 23.0
2249 Male, age 74, both hemispheres 27.5
1963 Male, age 80, left hemisphere 25.2
2113 Female, age 91, right hemisphere 23.5
1940 Female, age 85, left hemisphere 22.8
1892 Male, age 76, both hemispheres 21.1
2437 Female, age 94, left hemisphere 18.0
Hippocampus, CA3
nTPM: 21.0
2436 Male, age 74, both hemispheres 24.5
1891 Female, age 85, both hemispheres 22.8
2137 Male, age 80, left hemisphere 21.2
1867 Male, age 76, both hemispheres 20.6
2861 Female, age 67, both hemispheres 18.7
2620 Female, age 94, left hemisphere 18.2
Parahippocampal cortex
nTPM: 22.0
2250 Female, age 67, right hemisphere 25.7
1850 Male, age 80, both hemispheres 24.3
1990 Female, age 91, right hemisphere 23.3
1933 Female, age 85, both hemispheres 22.8
2018 Male, age 76, both hemispheres 22.2
2692 Male, age 74, both hemispheres 22.0
2532 Female, age 72, left hemisphere 21.1
2245 Female, age 91, both hemispheres 20.7
2622 Female, age 67, right hemisphere 18.9
2693 Female, age 94, both hemispheres 18.9
Perirhinal gyrus
nTPM: 25.5
1841 Female, age 85, right hemisphere 28.0
1847 Female, age 91, left hemisphere 27.6
1794 Male, age 80, right hemisphere 26.3
2848 Male, age 76, right hemisphere 23.4
2521 Female, age 94, right hemisphere 22.5
Subiculum
nTPM: 22.8
2729 Female, age 91, right hemisphere 24.5
1977 Female, age 85, both hemispheres 23.5
2619 Male, age 74, both hemispheres 22.4
2042 Male, age 76, both hemispheres 22.3
2438 Female, age 94, left hemisphere 22.3
1901 Male, age 80, both hemispheres 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 29.6
Min nTPM: 10.4
Std nTPM: 2.5
Median nTPM: 17.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 25.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 23.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 23.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.4
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 22.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 22.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 22.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.9
FF:10153-102I9 76 years, female 30.5
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.5
Pig sample Sample description nTPM
Subiculum
nTPM: 30.1
Samples: 4

Max nTPM: 35.5
Min nTPM: 26.9
Sample A Female 35.5
Sample B Female 29.6
Sample C Male 26.9
Sample D Male 28.5
Dorsal hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 42.5
Min nTPM: 29.0
Sample A Female 42.5
Sample B Female 34.7
Sample C Male 31.6
Sample D Male 29.0
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 23.6
Sample A Female 29.5
Sample B Female 30.0
Sample C Male 27.4
Sample D Male 23.6
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 38.1
Min nTPM: 26.1
Sample A Female 33.4
Sample B Female 26.1
Sample C Male 38.1
Sample D Male 36.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.6
Samples: 4

Max nTPM: 38.9
Min nTPM: 31.5
Sample A Male 33.8
Sample B Male 38.9
Sample C Female 38.1
Sample D Female 31.5
Hippocampal formation
nTPM: 35.5
Samples: 4

Max nTPM: 40.6
Min nTPM: 31.5
Sample A Male 40.6
Sample B Male 31.5
Sample C Female 35.7
Sample D Female 34.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68269289 Antisense, RP_041129_01_E08, Mouse strain C57BL/6J (56 days, male) 0.1

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