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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
72.0
nTPM
Monaco:
37.1
nTPM
Schmiedel:
17.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.0
HPA sample
nTPM
gdT-cell nTPM: 30.0
Samples: 6
Max nTPM: 37.6
Min nTPM: 25.7
P10809_1007
25.7
P10809_1022
32.3
P10809_1041
25.9
P10809_1060
28.9
P10809_1077
29.6
P10809_1098
37.6
MAIT T-cell nTPM: 39.7
Samples: 6
Max nTPM: 58.8
Min nTPM: 27.0
P10809_1006
27.0
P10809_1024
46.9
P10809_1043
29.2
P10809_1062
34.4
P10809_1083
41.6
P10809_1097
58.8
Memory CD4 T-cell nTPM: 54.3
Samples: 6
Max nTPM: 71.6
Min nTPM: 38.3
P10809_1014
38.3
P10809_1026
60.7
P10809_1045
45.0
P10809_1064
52.0
P10809_1086
58.1
P10809_1113
71.6
Memory CD8 T-cell nTPM: 43.0
Samples: 5
Max nTPM: 64.4
Min nTPM: 32.8
P10809_1012
35.6
P10809_1027
45.9
P10809_1046
32.8
P10809_1065
36.4
P10809_1111
64.4
Naive CD4 T-cell nTPM: 53.2
Samples: 6
Max nTPM: 57.8
Min nTPM: 42.9
P10809_1015
42.9
P10809_1030
56.8
P10809_1049
55.5
P10809_1068
50.5
P10809_1085
55.7
P10809_1112
57.8
Naive CD8 T-cell nTPM: 49.7
Samples: 6
Max nTPM: 65.8
Min nTPM: 35.0
P10809_1016
35.0
P10809_1031
61.0
P10809_1050
38.7
P10809_1069
55.4
P10809_1087
42.0
P10809_1110
65.8
T-reg nTPM: 72.1
Samples: 6
Max nTPM: 110.6
Min nTPM: 47.0
P10809_1018
47.0
P10809_1037
66.0
P10809_1056
73.3
P10809_1075
78.1
P10809_1094
57.3
P10809_1106
110.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 23.5
Samples: 4
Max nTPM: 35.2
Min nTPM: 10.8
RHH5202_R3573
18.5
RHH5230_R3602
10.8
RHH5259_R3631
29.3
RHH5288_R3660
35.2
Effector memory CD8 T-cell nTPM: 17.6
Samples: 4
Max nTPM: 22.3
Min nTPM: 15.5
RHH5203_R3574
22.3
RHH5231_R3603
16.0
RHH5260_R3632
15.5
RHH5289_R3661
16.7
MAIT T-cell nTPM: 24.0
Samples: 4
Max nTPM: 30.3
Min nTPM: 17.1
RHH5233_R3605
27.8
RHH5205_R3576
17.1
RHH5262_R3634
20.9
RHH5297_R3663
30.3
Memory CD4 T-cell TFH nTPM: 31.6
Samples: 4
Max nTPM: 40.6
Min nTPM: 26.9
RHH5300_R3666
30.6
RHH5236_R3608
40.6
RHH5265_R3637
26.9
RHH5208_R3579
28.2
Memory CD4 T-cell Th1 nTPM: 31.1
Samples: 4
Max nTPM: 35.3
Min nTPM: 21.4
RHH5210_R3581
34.0
RHH5302_R3668
35.3
RHH5238_R3610
33.8
RHH5267_R3639
21.4
Memory CD4 T-cell Th1/Th17 nTPM: 25.0
Samples: 4
Max nTPM: 37.2
Min nTPM: 10.4
RHH5303_R3669
27.7
RHH5211_R3582
37.2
RHH5239_R3611
10.4
RHH5268_R3640
24.7
Memory CD4 T-cell Th17 nTPM: 32.2
Samples: 4
Max nTPM: 46.6
Min nTPM: 23.2
RHH5304_R3670
26.3
RHH5212_R3583
46.6
RHH5240_R3612
23.2
RHH5269_R3641
32.7
Memory CD4 T-cell Th2 nTPM: 26.3
Samples: 4
Max nTPM: 30.5
Min nTPM: 21.9
RHH5305_R3671
26.2
RHH5213_R3584
26.5
RHH5241_R3613
30.5
RHH5270_R3642
21.9
Naive CD4 T-cell nTPM: 37.1
Samples: 4
Max nTPM: 43.5
Min nTPM: 27.6
RHH5306_R3672
36.9
RHH5214_R3585
40.5
RHH5242_R3614
43.5
RHH5271_R3643
27.6
Naive CD8 T-cell nTPM: 30.4
Samples: 4
Max nTPM: 40.2
Min nTPM: 21.9
RHH5201_R3572
34.9
RHH5229_R3601
21.9
RHH5258_R3630
40.2
RHH5287_R3659
24.7
Non-Vd2 gdTCR nTPM: 27.0
Samples: 4
Max nTPM: 31.7
Min nTPM: 18.1
RHH5235_R3607
18.1
RHH5264_R3636
31.7
RHH5207_R3578
29.2
RHH5299_R3665
28.8
T-reg nTPM: 35.9
Samples: 4
Max nTPM: 48.5
Min nTPM: 22.4
RHH5301_R3667
46.7
RHH5237_R3609
48.5
RHH5266_R3638
22.4
RHH5209_R3580
25.8
Terminal effector memory CD4 T-cell nTPM: 15.5
Samples: 2
Max nTPM: 23.5
Min nTPM: 7.5
RHH5243_R3615
7.5
RHH5272_R3644
23.5
Terminal effector memory CD8 T-cell nTPM: 22.4
Samples: 4
Max nTPM: 26.8
Min nTPM: 13.3
RHH5232_R3604
13.3
RHH5204_R3575
26.8
RHH5261_R3633
25.8
RHH5296_R3662
23.7
Vd2 gdTCR nTPM: 26.5
Samples: 4
Max nTPM: 35.8
Min nTPM: 17.5
RHH5234_R3606
17.5
RHH5206_R3577
33.8
RHH5263_R3635
18.9
RHH5298_R3664
35.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
