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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
142.0
nTPM
Monaco:
91.8
nTPM
Schmiedel:
125.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.0
HPA sample
nTPM
gdT-cell nTPM: 116.0
Samples: 6
Max nTPM: 151.8
Min nTPM: 81.4
P10809_1007
81.4
P10809_1022
133.5
P10809_1041
151.8
P10809_1060
104.7
P10809_1077
96.7
P10809_1098
127.6
MAIT T-cell nTPM: 124.4
Samples: 6
Max nTPM: 154.7
Min nTPM: 79.1
P10809_1006
79.1
P10809_1024
146.4
P10809_1043
154.7
P10809_1062
122.8
P10809_1083
99.9
P10809_1097
143.4
Memory CD4 T-cell nTPM: 112.3
Samples: 6
Max nTPM: 128.6
Min nTPM: 77.5
P10809_1014
77.5
P10809_1026
109.7
P10809_1045
128.6
P10809_1064
111.7
P10809_1086
120.8
P10809_1113
125.7
Memory CD8 T-cell nTPM: 126.0
Samples: 5
Max nTPM: 149.4
Min nTPM: 89.9
P10809_1012
89.9
P10809_1027
119.1
P10809_1046
149.4
P10809_1065
122.5
P10809_1111
149.1
Naive CD4 T-cell nTPM: 129.0
Samples: 6
Max nTPM: 176.3
Min nTPM: 93.2
P10809_1015
93.2
P10809_1030
130.1
P10809_1049
176.3
P10809_1068
120.3
P10809_1085
118.1
P10809_1112
135.9
Naive CD8 T-cell nTPM: 121.0
Samples: 6
Max nTPM: 139.2
Min nTPM: 87.2
P10809_1016
87.2
P10809_1031
106.6
P10809_1050
136.8
P10809_1069
139.2
P10809_1087
121.8
P10809_1110
134.5
T-reg nTPM: 142.0
Samples: 6
Max nTPM: 184.3
Min nTPM: 106.2
P10809_1018
106.2
P10809_1037
130.0
P10809_1056
184.3
P10809_1075
137.4
P10809_1094
146.4
P10809_1106
147.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 98.5
Min nTPM: 54.0
RHH5202_R3573
98.5
RHH5230_R3602
60.6
RHH5259_R3631
54.0
RHH5288_R3660
95.7
Effector memory CD8 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 99.6
Min nTPM: 48.7
RHH5203_R3574
99.6
RHH5231_R3603
83.6
RHH5260_R3632
48.7
RHH5289_R3661
77.0
MAIT T-cell nTPM: 88.4
Samples: 4
Max nTPM: 121.5
Min nTPM: 50.6
RHH5233_R3605
121.5
RHH5205_R3576
50.6
RHH5262_R3634
88.5
RHH5297_R3663
92.8
Memory CD4 T-cell TFH nTPM: 81.3
Samples: 4
Max nTPM: 110.8
Min nTPM: 62.7
RHH5300_R3666
69.4
RHH5236_R3608
110.8
RHH5265_R3637
62.7
RHH5208_R3579
82.3
Memory CD4 T-cell Th1 nTPM: 76.8
Samples: 4
Max nTPM: 108.9
Min nTPM: 48.0
RHH5210_R3581
108.9
RHH5302_R3668
94.0
RHH5238_R3610
48.0
RHH5267_R3639
56.1
Memory CD4 T-cell Th1/Th17 nTPM: 76.8
Samples: 4
Max nTPM: 109.3
Min nTPM: 50.1
RHH5303_R3669
96.9
RHH5211_R3582
109.3
RHH5239_R3611
50.1
RHH5268_R3640
51.0
Memory CD4 T-cell Th17 nTPM: 70.4
Samples: 4
Max nTPM: 91.8
Min nTPM: 52.6
RHH5304_R3670
72.9
RHH5212_R3583
91.8
RHH5240_R3612
52.6
RHH5269_R3641
64.2
Memory CD4 T-cell Th2 nTPM: 79.8
Samples: 4
Max nTPM: 102.2
Min nTPM: 64.6
RHH5305_R3671
64.6
RHH5213_R3584
84.7
RHH5241_R3613
102.2
RHH5270_R3642
67.7
Naive CD4 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 99.3
Min nTPM: 54.7
RHH5306_R3672
71.5
RHH5214_R3585
99.3
RHH5242_R3614
93.9
RHH5271_R3643
54.7
Naive CD8 T-cell nTPM: 71.7
Samples: 4
Max nTPM: 103.7
Min nTPM: 46.6
RHH5201_R3572
77.5
RHH5229_R3601
46.6
RHH5258_R3630
103.7
RHH5287_R3659
58.9
Non-Vd2 gdTCR nTPM: 77.6
Samples: 4
Max nTPM: 121.3
Min nTPM: 35.0
RHH5235_R3607
35.0
RHH5264_R3636
121.3
RHH5207_R3578
78.9
RHH5299_R3665
75.1
T-reg nTPM: 91.8
Samples: 4
Max nTPM: 116.8
Min nTPM: 63.9
RHH5301_R3667
89.2
RHH5237_R3609
116.8
RHH5266_R3638
63.9
RHH5209_R3580
97.4
Terminal effector memory CD4 T-cell nTPM: 76.5
Samples: 2
Max nTPM: 99.4
Min nTPM: 53.6
RHH5243_R3615
53.6
RHH5272_R3644
99.4
Terminal effector memory CD8 T-cell nTPM: 79.9
Samples: 4
Max nTPM: 106.0
Min nTPM: 50.9
RHH5232_R3604
90.3
RHH5204_R3575
106.0
RHH5261_R3633
50.9
RHH5296_R3662
72.2
Vd2 gdTCR nTPM: 80.3
Samples: 4
Max nTPM: 114.2
Min nTPM: 61.1
RHH5234_R3606
66.7
RHH5206_R3577
114.2
RHH5263_R3635
61.1
RHH5298_R3664
79.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
