HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.1 nTPM
HPA Brain:10.5 nTPM
GTEx:20.1 nTPM
FANTOM5:24.2 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:7.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004895Antibody CAB013018
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
2529 Female, age 94, left hemisphere 13.1
1898 Male, age 80, left hemisphere 10.8
2621 Female, age 67, right hemisphere 8.7
2148 Female, age 91, left hemisphere 7.8
1911 Female, age 85, right hemisphere 7.5
1855 Male, age 76, left hemisphere 6.8
Dentate gyrus
nTPM: 8.0
2530 Female, age 94, left hemisphere 10.9
1927 Female, age 91, both hemispheres 8.5
2528 Male, age 74, both hemispheres 8.1
2010 Male, age 76, both hemispheres 7.6
2531 Female, age 67, both hemispheres 7.2
2246 Female, age 85, both hemispheres 5.4
Entorhinal gyrus
nTPM: 10.1
2117 Female, age 91, right hemisphere 11.2
1938 Female, age 85, left hemisphere 10.9
2764 Male, age 80, right hemisphere 10.7
2613 Female, age 94, left hemisphere 9.4
1787 Male, age 76, left hemisphere 9.3
2686 Male, age 75, right hemisphere 9.2
Hippocampus, CA1
nTPM: 7.4
2082 Female, age 91, right hemisphere 9.8
2527 Male, age 74, both hemispheres 7.7
1873 Female, age 85, both hemispheres 7.3
2749 Male, age 80, left hemisphere 6.2
2045 Male, age 76, both hemispheres 5.8
Hippocampus, CA2
nTPM: 9.7
2437 Female, age 94, left hemisphere 10.4
2249 Male, age 74, both hemispheres 10.1
1963 Male, age 80, left hemisphere 9.8
1940 Female, age 85, left hemisphere 9.4
2113 Female, age 91, right hemisphere 9.4
1892 Male, age 76, both hemispheres 8.9
Hippocampus, CA3
nTPM: 8.2
2436 Male, age 74, both hemispheres 9.2
2620 Female, age 94, left hemisphere 8.9
2861 Female, age 67, both hemispheres 8.2
1891 Female, age 85, both hemispheres 8.1
2137 Male, age 80, left hemisphere 7.6
1867 Male, age 76, both hemispheres 7.3
Parahippocampal cortex
nTPM: 8.9
1990 Female, age 91, right hemisphere 12.0
1850 Male, age 80, both hemispheres 10.8
1933 Female, age 85, both hemispheres 9.4
2692 Male, age 74, both hemispheres 9.2
2250 Female, age 67, right hemisphere 9.1
2018 Male, age 76, both hemispheres 9.0
2622 Female, age 67, right hemisphere 8.6
2245 Female, age 91, both hemispheres 7.5
2693 Female, age 94, both hemispheres 6.8
2532 Female, age 72, left hemisphere 6.4
Perirhinal gyrus
nTPM: 10.5
1794 Male, age 80, right hemisphere 12.2
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.5
2848 Male, age 76, right hemisphere 9.2
2521 Female, age 94, right hemisphere 7.8
Subiculum
nTPM: 8.7
2042 Male, age 76, both hemispheres 9.9
2619 Male, age 74, both hemispheres 9.6
1901 Male, age 80, both hemispheres 9.2
2729 Female, age 91, right hemisphere 8.9
1977 Female, age 85, both hemispheres 8.8
2438 Female, age 94, left hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 70.9
Min nTPM: 9.6
Std nTPM: 6.7
Median nTPM: 19.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 70.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 49.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 42.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 38.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 37.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 33.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 30.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.2
FF:10153-102I9 76 years, female 33.9
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.3
Pig sample Sample description nTPM
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.1
Sample A Female 12.3
Sample B Female 11.1
Sample C Male 11.8
Sample D Male 14.7
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 15.1
Min nTPM: 10.7
Sample A Female 13.5
Sample B Female 10.7
Sample C Male 15.1
Sample D Male 11.2
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.1
Sample A Female 12.2
Sample B Female 11.7
Sample C Male 12.0
Sample D Male 10.1
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.8
Min nTPM: 11.3
Sample A Female 14.7
Sample B Female 11.3
Sample C Male 16.8
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.3
Sample A Male 5.8
Sample B Male 6.7
Sample C Female 5.7
Sample D Female 5.3
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.1
Sample A Male 7.3
Sample B Male 6.1
Sample C Female 7.1
Sample D Female 10.0

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