HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:80.3 nTPM
HPA Brain:65.0 nTPM
GTEx:80.3 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:97.8 nTPM
Mouse:189.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069769Antibody CAB022550
Glial cells Not detectedLow
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.0
Sample id Sample description nTPM
Hippocampus
nTPM: 56.4
1898 Male, age 80, left hemisphere 64.4
2621 Female, age 67, right hemisphere 57.6
1911 Female, age 85, right hemisphere 57.3
1855 Male, age 76, left hemisphere 54.9
2148 Female, age 91, left hemisphere 53.0
2529 Female, age 94, left hemisphere 51.4
Dentate gyrus
nTPM: 59.7
2530 Female, age 94, left hemisphere 70.2
2010 Male, age 76, both hemispheres 63.2
1927 Female, age 91, both hemispheres 62.6
2246 Female, age 85, both hemispheres 57.6
2528 Male, age 74, both hemispheres 55.1
2531 Female, age 67, both hemispheres 49.6
Entorhinal gyrus
nTPM: 55.1
1938 Female, age 85, left hemisphere 59.0
2764 Male, age 80, right hemisphere 56.2
2117 Female, age 91, right hemisphere 55.9
1787 Male, age 76, left hemisphere 55.2
2613 Female, age 94, left hemisphere 53.4
2686 Male, age 75, right hemisphere 50.9
Hippocampus, CA1
nTPM: 65.0
2749 Male, age 80, left hemisphere 95.9
1873 Female, age 85, both hemispheres 61.3
2527 Male, age 74, both hemispheres 60.2
2082 Female, age 91, right hemisphere 55.9
2045 Male, age 76, both hemispheres 51.8
Hippocampus, CA2
nTPM: 61.4
1963 Male, age 80, left hemisphere 72.2
1892 Male, age 76, both hemispheres 71.7
2249 Male, age 74, both hemispheres 66.6
2437 Female, age 94, left hemisphere 63.9
2113 Female, age 91, right hemisphere 49.0
1940 Female, age 85, left hemisphere 45.0
Hippocampus, CA3
nTPM: 60.9
2137 Male, age 80, left hemisphere 77.4
1867 Male, age 76, both hemispheres 69.8
2436 Male, age 74, both hemispheres 58.4
2620 Female, age 94, left hemisphere 57.6
1891 Female, age 85, both hemispheres 54.2
2861 Female, age 67, both hemispheres 47.7
Parahippocampal cortex
nTPM: 52.4
2245 Female, age 91, both hemispheres 58.2
1933 Female, age 85, both hemispheres 56.9
2250 Female, age 67, right hemisphere 56.9
1990 Female, age 91, right hemisphere 54.4
2532 Female, age 72, left hemisphere 54.3
2018 Male, age 76, both hemispheres 53.1
1850 Male, age 80, both hemispheres 50.8
2692 Male, age 74, both hemispheres 49.0
2693 Female, age 94, both hemispheres 48.4
2622 Female, age 67, right hemisphere 42.1
Perirhinal gyrus
nTPM: 53.6
1847 Female, age 91, left hemisphere 63.0
1794 Male, age 80, right hemisphere 58.8
1841 Female, age 85, right hemisphere 54.1
2521 Female, age 94, right hemisphere 47.7
2848 Male, age 76, right hemisphere 44.4
Subiculum
nTPM: 56.7
1901 Male, age 80, both hemispheres 65.4
1977 Female, age 85, both hemispheres 62.4
2042 Male, age 76, both hemispheres 57.1
2438 Female, age 94, left hemisphere 55.4
2619 Male, age 74, both hemispheres 51.3
2729 Female, age 91, right hemisphere 48.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.3
Samples: 197

Max nTPM: 186.1
Min nTPM: 41.9
Std nTPM: 18.2
Median nTPM: 77.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 186.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 144.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 131.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 126.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 122.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 117.7
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 117.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 115.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 112.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 109.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 108.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.3
FF:10153-102I9 76 years, female 28.0
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 97.8
Pig sample Sample description nTPM
Subiculum
nTPM: 86.4
Samples: 4

Max nTPM: 107.9
Min nTPM: 78.2
Sample A Female 107.9
Sample B Female 78.4
Sample C Male 80.9
Sample D Male 78.2
Dorsal hippocampus
nTPM: 97.9
Samples: 4

Max nTPM: 123.3
Min nTPM: 74.6
Sample A Female 123.3
Sample B Female 99.1
Sample C Male 94.4
Sample D Male 74.6
Entorhinal cortex
nTPM: 77.5
Samples: 4

Max nTPM: 84.8
Min nTPM: 62.3
Sample A Female 84.8
Sample B Female 79.4
Sample C Male 83.3
Sample D Male 62.3
Ventral hippocampus
nTPM: 95.4
Samples: 4

Max nTPM: 114.2
Min nTPM: 69.8
Sample A Female 101.6
Sample B Female 69.8
Sample C Male 114.2
Sample D Male 96.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 189.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 167.2
Samples: 4

Max nTPM: 183.5
Min nTPM: 149.9
Sample A Male 149.9
Sample B Male 166.2
Sample C Female 183.5
Sample D Female 169.3
Hippocampal formation
nTPM: 189.2
Samples: 4

Max nTPM: 207.7
Min nTPM: 176.9
Sample A Male 207.7
Sample B Male 184.5
Sample C Female 176.9
Sample D Female 187.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
75695659 Antisense, RP_060518_04_C10, Mouse strain C57BL/6J (56 days, male) 1.7

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