HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:65.7 nTPM
HPA Brain:166.5 nTPM
GTEx:65.7 nTPM
FANTOM5:127.9 Scaled Tags Per Million
Pig:76.8 nTPM
Mouse:141.4 nTPM
Allen mouse:16.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028215
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 166.5
Sample id Sample description nTPM
Hippocampus
nTPM: 147.5
2529 Female, age 94, left hemisphere 169.0
1911 Female, age 85, right hemisphere 157.9
2621 Female, age 67, right hemisphere 150.5
2148 Female, age 91, left hemisphere 149.5
1898 Male, age 80, left hemisphere 132.2
1855 Male, age 76, left hemisphere 126.2
Dentate gyrus
nTPM: 144.9
2530 Female, age 94, left hemisphere 148.9
2010 Male, age 76, both hemispheres 148.3
2246 Female, age 85, both hemispheres 147.4
2531 Female, age 67, both hemispheres 146.1
1927 Female, age 91, both hemispheres 141.4
2528 Male, age 74, both hemispheres 137.0
Entorhinal gyrus
nTPM: 166.5
2117 Female, age 91, right hemisphere 176.6
2686 Male, age 75, right hemisphere 171.7
2613 Female, age 94, left hemisphere 171.6
2764 Male, age 80, right hemisphere 167.5
1938 Female, age 85, left hemisphere 158.1
1787 Male, age 76, left hemisphere 153.6
Hippocampus, CA1
nTPM: 144.1
2082 Female, age 91, right hemisphere 154.7
2527 Male, age 74, both hemispheres 150.7
1873 Female, age 85, both hemispheres 144.7
2749 Male, age 80, left hemisphere 139.9
2045 Male, age 76, both hemispheres 130.6
Hippocampus, CA2
nTPM: 150.3
2113 Female, age 91, right hemisphere 165.4
1940 Female, age 85, left hemisphere 153.5
1963 Male, age 80, left hemisphere 151.3
2437 Female, age 94, left hemisphere 147.6
2249 Male, age 74, both hemispheres 145.7
1892 Male, age 76, both hemispheres 138.2
Hippocampus, CA3
nTPM: 144.9
1891 Female, age 85, both hemispheres 163.6
1867 Male, age 76, both hemispheres 149.4
2620 Female, age 94, left hemisphere 145.6
2137 Male, age 80, left hemisphere 140.1
2436 Male, age 74, both hemispheres 138.8
2861 Female, age 67, both hemispheres 131.7
Parahippocampal cortex
nTPM: 157.3
2532 Female, age 72, left hemisphere 173.3
1933 Female, age 85, both hemispheres 162.1
1990 Female, age 91, right hemisphere 161.3
2692 Male, age 74, both hemispheres 160.0
2245 Female, age 91, both hemispheres 158.8
1850 Male, age 80, both hemispheres 157.5
2693 Female, age 94, both hemispheres 156.0
2018 Male, age 76, both hemispheres 155.7
2250 Female, age 67, right hemisphere 144.7
2622 Female, age 67, right hemisphere 143.8
Perirhinal gyrus
nTPM: 154.7
1841 Female, age 85, right hemisphere 158.7
1794 Male, age 80, right hemisphere 158.3
2521 Female, age 94, right hemisphere 157.9
1847 Female, age 91, left hemisphere 153.1
2848 Male, age 76, right hemisphere 145.3
Subiculum
nTPM: 160.4
2042 Male, age 76, both hemispheres 169.2
1977 Female, age 85, both hemispheres 163.9
1901 Male, age 80, both hemispheres 163.8
2619 Male, age 74, both hemispheres 157.0
2438 Female, age 94, left hemisphere 154.4
2729 Female, age 91, right hemisphere 154.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.7
Samples: 197

Max nTPM: 134.7
Min nTPM: 36.9
Std nTPM: 15.9
Median nTPM: 63.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 134.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 124.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 118.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 116.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 115.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 110.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 104.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 102.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 101.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 100.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 95.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.9
FF:10153-102I9 76 years, female 158.2
FF:10169-103B7 60 years, female 97.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.8
Pig sample Sample description nTPM
Subiculum
nTPM: 76.8
Samples: 4

Max nTPM: 90.0
Min nTPM: 67.9
Sample A Female 90.0
Sample B Female 73.1
Sample C Male 76.3
Sample D Male 67.9
Dorsal hippocampus
nTPM: 74.2
Samples: 4

Max nTPM: 83.2
Min nTPM: 66.8
Sample A Female 83.2
Sample B Female 72.5
Sample C Male 74.4
Sample D Male 66.8
Entorhinal cortex
nTPM: 73.6
Samples: 4

Max nTPM: 75.7
Min nTPM: 70.9
Sample A Female 75.7
Sample B Female 75.1
Sample C Male 72.7
Sample D Male 70.9
Ventral hippocampus
nTPM: 74.0
Samples: 4

Max nTPM: 80.3
Min nTPM: 69.1
Sample A Female 71.3
Sample B Female 69.1
Sample C Male 80.3
Sample D Male 75.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.4
Samples: 4

Max nTPM: 149.8
Min nTPM: 137.5
Sample A Male 138.1
Sample B Male 149.8
Sample C Female 140.1
Sample D Female 137.5
Hippocampal formation
nTPM: 137.4
Samples: 4

Max nTPM: 146.7
Min nTPM: 131.9
Sample A Male 146.7
Sample B Male 138.9
Sample C Female 132.0
Sample D Female 131.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.9
81599666 Antisense, RP_071219_02_F03, Mouse strain C57BL/6J (56 days, male) 16.9

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