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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.8
nTPM
Monaco:
59.1
nTPM
Schmiedel:
644.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.8
HPA sample
nTPM
gdT-cell nTPM: 42.9
Samples: 6
Max nTPM: 48.9
Min nTPM: 35.5
P10809_1007
39.6
P10809_1022
38.4
P10809_1041
48.9
P10809_1060
35.5
P10809_1077
46.3
P10809_1098
48.9
MAIT T-cell nTPM: 35.1
Samples: 6
Max nTPM: 46.3
Min nTPM: 22.7
P10809_1006
22.7
P10809_1024
28.4
P10809_1043
41.0
P10809_1062
32.3
P10809_1083
39.7
P10809_1097
46.3
Memory CD4 T-cell nTPM: 56.9
Samples: 6
Max nTPM: 92.3
Min nTPM: 40.6
P10809_1014
46.2
P10809_1026
92.3
P10809_1045
48.9
P10809_1064
61.1
P10809_1086
40.6
P10809_1113
52.3
Memory CD8 T-cell nTPM: 44.0
Samples: 5
Max nTPM: 54.7
Min nTPM: 32.0
P10809_1012
32.0
P10809_1027
54.7
P10809_1046
49.9
P10809_1065
41.7
P10809_1111
41.7
Naive CD4 T-cell nTPM: 53.9
Samples: 6
Max nTPM: 68.1
Min nTPM: 33.3
P10809_1015
33.3
P10809_1030
63.2
P10809_1049
68.1
P10809_1068
64.7
P10809_1085
43.6
P10809_1112
50.2
Naive CD8 T-cell nTPM: 44.6
Samples: 6
Max nTPM: 64.8
Min nTPM: 36.3
P10809_1016
40.2
P10809_1031
64.8
P10809_1050
49.0
P10809_1069
39.1
P10809_1087
36.3
P10809_1110
38.4
T-reg nTPM: 59.8
Samples: 6
Max nTPM: 84.2
Min nTPM: 43.0
P10809_1018
43.0
P10809_1037
44.7
P10809_1056
84.2
P10809_1075
54.9
P10809_1094
59.2
P10809_1106
72.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 77.2
Min nTPM: 29.9
RHH5202_R3573
77.2
RHH5230_R3602
34.2
RHH5259_R3631
35.2
RHH5288_R3660
29.9
Effector memory CD8 T-cell nTPM: 21.5
Samples: 4
Max nTPM: 35.3
Min nTPM: 8.1
RHH5203_R3574
35.3
RHH5231_R3603
26.6
RHH5260_R3632
15.8
RHH5289_R3661
8.1
MAIT T-cell nTPM: 29.5
Samples: 4
Max nTPM: 39.0
Min nTPM: 16.8
RHH5233_R3605
16.8
RHH5205_R3576
39.0
RHH5262_R3634
38.7
RHH5297_R3663
23.3
Memory CD4 T-cell TFH nTPM: 44.9
Samples: 4
Max nTPM: 74.4
Min nTPM: 31.8
RHH5300_R3666
31.8
RHH5236_R3608
40.4
RHH5265_R3637
32.8
RHH5208_R3579
74.4
Memory CD4 T-cell Th1 nTPM: 50.9
Samples: 4
Max nTPM: 95.2
Min nTPM: 30.7
RHH5210_R3581
95.2
RHH5302_R3668
43.4
RHH5238_R3610
34.2
RHH5267_R3639
30.7
Memory CD4 T-cell Th1/Th17 nTPM: 36.3
Samples: 4
Max nTPM: 57.9
Min nTPM: 17.9
RHH5303_R3669
32.5
RHH5211_R3582
57.9
RHH5239_R3611
17.9
RHH5268_R3640
36.9
Memory CD4 T-cell Th17 nTPM: 32.6
Samples: 4
Max nTPM: 64.9
Min nTPM: 19.8
RHH5304_R3670
21.9
RHH5212_R3583
64.9
RHH5240_R3612
19.8
RHH5269_R3641
23.9
Memory CD4 T-cell Th2 nTPM: 51.4
Samples: 4
Max nTPM: 74.9
Min nTPM: 26.6
RHH5305_R3671
26.6
RHH5213_R3584
74.9
RHH5241_R3613
56.6
RHH5270_R3642
47.5
Naive CD4 T-cell nTPM: 59.1
Samples: 4
Max nTPM: 101.1
Min nTPM: 41.3
RHH5306_R3672
51.1
RHH5214_R3585
101.1
RHH5242_R3614
42.7
RHH5271_R3643
41.3
Naive CD8 T-cell nTPM: 51.0
Samples: 4
Max nTPM: 71.9
Min nTPM: 34.1
RHH5201_R3572
59.5
RHH5229_R3601
34.1
RHH5258_R3630
71.9
RHH5287_R3659
38.4
Non-Vd2 gdTCR nTPM: 27.3
Samples: 4
Max nTPM: 36.0
Min nTPM: 19.4
RHH5235_R3607
24.7
RHH5264_R3636
19.4
RHH5207_R3578
36.0
RHH5299_R3665
29.1
T-reg nTPM: 40.5
Samples: 4
Max nTPM: 51.4
Min nTPM: 33.0
RHH5301_R3667
42.4
RHH5237_R3609
35.2
RHH5266_R3638
33.0
RHH5209_R3580
51.4
Terminal effector memory CD4 T-cell nTPM: 24.8
Samples: 2
Max nTPM: 29.1
Min nTPM: 20.4
RHH5243_R3615
20.4
RHH5272_R3644
29.1
Terminal effector memory CD8 T-cell nTPM: 32.7
Samples: 4
Max nTPM: 66.6
Min nTPM: 16.5
RHH5232_R3604
24.9
RHH5204_R3575
66.6
RHH5261_R3633
16.5
RHH5296_R3662
22.8
Vd2 gdTCR nTPM: 35.6
Samples: 4
Max nTPM: 56.0
Min nTPM: 20.8
RHH5234_R3606
27.4
RHH5206_R3577
56.0
RHH5263_R3635
20.8
RHH5298_R3664
38.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
