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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
214.0
nTPM
Monaco:
98.9
nTPM
Schmiedel:
95.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
214.0
HPA sample
nTPM
gdT-cell nTPM: 133.1
Samples: 6
Max nTPM: 151.7
Min nTPM: 104.4
P10809_1007
124.4
P10809_1022
144.0
P10809_1041
151.7
P10809_1060
104.4
P10809_1077
143.9
P10809_1098
130.2
MAIT T-cell nTPM: 111.9
Samples: 6
Max nTPM: 142.3
Min nTPM: 84.1
P10809_1006
86.7
P10809_1024
142.3
P10809_1043
127.2
P10809_1062
99.8
P10809_1083
84.1
P10809_1097
131.0
Memory CD4 T-cell nTPM: 146.8
Samples: 6
Max nTPM: 197.2
Min nTPM: 113.8
P10809_1014
113.8
P10809_1026
197.2
P10809_1045
157.7
P10809_1064
143.5
P10809_1086
131.0
P10809_1113
137.4
Memory CD8 T-cell nTPM: 150.6
Samples: 5
Max nTPM: 182.3
Min nTPM: 124.0
P10809_1012
124.0
P10809_1027
182.3
P10809_1046
163.0
P10809_1065
135.4
P10809_1111
148.2
Naive CD4 T-cell nTPM: 101.5
Samples: 6
Max nTPM: 126.1
Min nTPM: 79.1
P10809_1015
79.1
P10809_1030
126.1
P10809_1049
119.5
P10809_1068
93.2
P10809_1085
96.9
P10809_1112
94.2
Naive CD8 T-cell nTPM: 115.1
Samples: 6
Max nTPM: 161.5
Min nTPM: 74.0
P10809_1016
77.8
P10809_1031
161.5
P10809_1050
127.4
P10809_1069
120.3
P10809_1087
129.7
P10809_1110
74.0
T-reg nTPM: 214.0
Samples: 6
Max nTPM: 254.7
Min nTPM: 161.9
P10809_1018
205.7
P10809_1037
254.7
P10809_1056
227.8
P10809_1075
188.0
P10809_1094
161.9
P10809_1106
246.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 56.0
Samples: 4
Max nTPM: 82.6
Min nTPM: 36.3
RHH5202_R3573
52.8
RHH5230_R3602
36.3
RHH5259_R3631
52.3
RHH5288_R3660
82.6
Effector memory CD8 T-cell nTPM: 56.2
Samples: 4
Max nTPM: 69.4
Min nTPM: 39.5
RHH5203_R3574
69.4
RHH5231_R3603
60.7
RHH5260_R3632
55.0
RHH5289_R3661
39.5
MAIT T-cell nTPM: 58.4
Samples: 4
Max nTPM: 93.1
Min nTPM: 32.7
RHH5233_R3605
59.8
RHH5205_R3576
32.7
RHH5262_R3634
47.9
RHH5297_R3663
93.1
Memory CD4 T-cell TFH nTPM: 98.8
Samples: 4
Max nTPM: 152.0
Min nTPM: 64.3
RHH5300_R3666
81.6
RHH5236_R3608
152.0
RHH5265_R3637
64.3
RHH5208_R3579
97.4
Memory CD4 T-cell Th1 nTPM: 76.7
Samples: 4
Max nTPM: 125.6
Min nTPM: 54.3
RHH5210_R3581
54.3
RHH5302_R3668
125.6
RHH5238_R3610
71.6
RHH5267_R3639
55.2
Memory CD4 T-cell Th1/Th17 nTPM: 82.4
Samples: 4
Max nTPM: 129.0
Min nTPM: 39.7
RHH5303_R3669
129.0
RHH5211_R3582
89.0
RHH5239_R3611
39.7
RHH5268_R3640
71.7
Memory CD4 T-cell Th17 nTPM: 59.3
Samples: 4
Max nTPM: 81.9
Min nTPM: 42.2
RHH5304_R3670
60.3
RHH5212_R3583
81.9
RHH5240_R3612
52.7
RHH5269_R3641
42.2
Memory CD4 T-cell Th2 nTPM: 63.5
Samples: 4
Max nTPM: 86.6
Min nTPM: 45.9
RHH5305_R3671
72.3
RHH5213_R3584
49.0
RHH5241_R3613
86.6
RHH5270_R3642
45.9
Naive CD4 T-cell nTPM: 49.2
Samples: 4
Max nTPM: 71.9
Min nTPM: 32.2
RHH5306_R3672
52.7
RHH5214_R3585
71.9
RHH5242_R3614
32.2
RHH5271_R3643
40.0
Naive CD8 T-cell nTPM: 28.2
Samples: 4
Max nTPM: 37.5
Min nTPM: 20.5
RHH5201_R3572
23.1
RHH5229_R3601
20.5
RHH5258_R3630
37.5
RHH5287_R3659
31.8
Non-Vd2 gdTCR nTPM: 71.6
Samples: 4
Max nTPM: 112.0
Min nTPM: 46.9
RHH5235_R3607
46.9
RHH5264_R3636
77.9
RHH5207_R3578
49.7
RHH5299_R3665
112.0
T-reg nTPM: 75.6
Samples: 4
Max nTPM: 101.7
Min nTPM: 47.8
RHH5301_R3667
101.7
RHH5237_R3609
92.8
RHH5266_R3638
47.8
RHH5209_R3580
60.0
Terminal effector memory CD4 T-cell nTPM: 55.6
Samples: 2
Max nTPM: 71.3
Min nTPM: 39.9
RHH5243_R3615
39.9
RHH5272_R3644
71.3
Terminal effector memory CD8 T-cell nTPM: 91.8
Samples: 4
Max nTPM: 169.0
Min nTPM: 57.5
RHH5232_R3604
57.9
RHH5204_R3575
169.0
RHH5261_R3633
57.5
RHH5296_R3662
82.6
Vd2 gdTCR nTPM: 91.3
Samples: 4
Max nTPM: 151.4
Min nTPM: 54.6
RHH5234_R3606
55.6
RHH5206_R3577
151.4
RHH5263_R3635
54.6
RHH5298_R3664
103.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
