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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.4
nTPM
Monaco:
225.3
nTPM
Schmiedel:
253.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.4
HPA sample
nTPM
gdT-cell nTPM: 39.5
Samples: 6
Max nTPM: 59.5
Min nTPM: 29.7
P10809_1007
37.0
P10809_1022
39.1
P10809_1041
59.5
P10809_1060
29.9
P10809_1077
29.7
P10809_1098
41.5
MAIT T-cell nTPM: 34.1
Samples: 6
Max nTPM: 50.0
Min nTPM: 19.7
P10809_1006
40.1
P10809_1024
22.0
P10809_1043
50.0
P10809_1062
36.8
P10809_1083
19.7
P10809_1097
35.8
Memory CD4 T-cell nTPM: 31.8
Samples: 6
Max nTPM: 35.5
Min nTPM: 25.4
P10809_1014
34.2
P10809_1026
35.3
P10809_1045
35.5
P10809_1064
29.7
P10809_1086
25.4
P10809_1113
30.9
Memory CD8 T-cell nTPM: 35.0
Samples: 5
Max nTPM: 40.2
Min nTPM: 31.7
P10809_1012
38.3
P10809_1027
32.1
P10809_1046
40.2
P10809_1065
32.5
P10809_1111
31.7
Naive CD4 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 29.7
Min nTPM: 17.4
P10809_1015
28.5
P10809_1030
22.1
P10809_1049
27.7
P10809_1068
22.5
P10809_1085
17.4
P10809_1112
29.7
Naive CD8 T-cell nTPM: 31.1
Samples: 6
Max nTPM: 41.4
Min nTPM: 18.4
P10809_1016
33.0
P10809_1031
41.4
P10809_1050
39.0
P10809_1069
18.4
P10809_1087
24.9
P10809_1110
30.1
T-reg nTPM: 40.3
Samples: 6
Max nTPM: 61.9
Min nTPM: 20.7
P10809_1018
61.9
P10809_1037
25.2
P10809_1056
34.3
P10809_1075
48.3
P10809_1094
20.7
P10809_1106
51.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 188.3
Samples: 4
Max nTPM: 251.6
Min nTPM: 113.5
RHH5202_R3573
113.5
RHH5230_R3602
199.9
RHH5259_R3631
251.6
RHH5288_R3660
188.0
Effector memory CD8 T-cell nTPM: 188.4
Samples: 4
Max nTPM: 247.6
Min nTPM: 158.8
RHH5203_R3574
158.8
RHH5231_R3603
166.8
RHH5260_R3632
247.6
RHH5289_R3661
180.4
MAIT T-cell nTPM: 179.0
Samples: 4
Max nTPM: 198.5
Min nTPM: 165.5
RHH5233_R3605
175.7
RHH5205_R3576
165.5
RHH5262_R3634
176.4
RHH5297_R3663
198.5
Memory CD4 T-cell TFH nTPM: 176.6
Samples: 4
Max nTPM: 219.5
Min nTPM: 128.5
RHH5300_R3666
218.1
RHH5236_R3608
140.2
RHH5265_R3637
219.5
RHH5208_R3579
128.5
Memory CD4 T-cell Th1 nTPM: 204.4
Samples: 4
Max nTPM: 275.3
Min nTPM: 156.0
RHH5210_R3581
156.0
RHH5302_R3668
175.4
RHH5238_R3610
275.3
RHH5267_R3639
210.7
Memory CD4 T-cell Th1/Th17 nTPM: 191.2
Samples: 4
Max nTPM: 240.3
Min nTPM: 129.9
RHH5303_R3669
129.9
RHH5211_R3582
185.2
RHH5239_R3611
240.3
RHH5268_R3640
209.5
Memory CD4 T-cell Th17 nTPM: 186.6
Samples: 4
Max nTPM: 216.1
Min nTPM: 153.6
RHH5304_R3670
174.4
RHH5212_R3583
153.6
RHH5240_R3612
202.2
RHH5269_R3641
216.1
Memory CD4 T-cell Th2 nTPM: 184.2
Samples: 4
Max nTPM: 236.3
Min nTPM: 110.9
RHH5305_R3671
236.3
RHH5213_R3584
179.4
RHH5241_R3613
110.9
RHH5270_R3642
210.0
Naive CD4 T-cell nTPM: 187.6
Samples: 4
Max nTPM: 234.5
Min nTPM: 151.8
RHH5306_R3672
202.2
RHH5214_R3585
161.7
RHH5242_R3614
151.8
RHH5271_R3643
234.5
Naive CD8 T-cell nTPM: 153.5
Samples: 4
Max nTPM: 176.6
Min nTPM: 102.2
RHH5201_R3572
102.2
RHH5229_R3601
165.3
RHH5258_R3630
176.6
RHH5287_R3659
169.8
Non-Vd2 gdTCR nTPM: 194.2
Samples: 4
Max nTPM: 211.9
Min nTPM: 151.9
RHH5235_R3607
211.9
RHH5264_R3636
202.1
RHH5207_R3578
151.9
RHH5299_R3665
210.7
T-reg nTPM: 213.3
Samples: 4
Max nTPM: 226.5
Min nTPM: 190.8
RHH5301_R3667
218.6
RHH5237_R3609
217.1
RHH5266_R3638
226.5
RHH5209_R3580
190.8
Terminal effector memory CD4 T-cell nTPM: 225.4
Samples: 2
Max nTPM: 236.7
Min nTPM: 214.0
RHH5243_R3615
236.7
RHH5272_R3644
214.0
Terminal effector memory CD8 T-cell nTPM: 194.4
Samples: 4
Max nTPM: 253.0
Min nTPM: 168.9
RHH5232_R3604
185.5
RHH5204_R3575
170.1
RHH5261_R3633
253.0
RHH5296_R3662
168.9
Vd2 gdTCR nTPM: 180.4
Samples: 4
Max nTPM: 206.7
Min nTPM: 155.5
RHH5234_R3606
170.0
RHH5206_R3577
155.5
RHH5263_R3635
206.7
RHH5298_R3664
189.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
