HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:44.7 nTPM
HPA Brain:68.5 nTPM
GTEx:44.7 nTPM
FANTOM5:262.6 Scaled Tags Per Million
Pig:74.1 nTPM
Mouse:24.4 nTPM
Allen mouse:16.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA075076
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.5
Sample id Sample description nTPM
Hippocampus
nTPM: 65.0
2621 Female, age 67, right hemisphere 75.8
2529 Female, age 94, left hemisphere 69.5
2148 Female, age 91, left hemisphere 68.7
1911 Female, age 85, right hemisphere 67.3
1855 Male, age 76, left hemisphere 60.0
1898 Male, age 80, left hemisphere 48.5
Dentate gyrus
nTPM: 64.1
2531 Female, age 67, both hemispheres 91.9
2246 Female, age 85, both hemispheres 69.3
2530 Female, age 94, left hemisphere 62.9
2528 Male, age 74, both hemispheres 55.3
1927 Female, age 91, both hemispheres 53.0
2010 Male, age 76, both hemispheres 52.3
Entorhinal gyrus
nTPM: 64.4
2686 Male, age 75, right hemisphere 80.0
2613 Female, age 94, left hemisphere 72.6
2117 Female, age 91, right hemisphere 63.5
1787 Male, age 76, left hemisphere 60.0
1938 Female, age 85, left hemisphere 58.5
2764 Male, age 80, right hemisphere 51.8
Hippocampus, CA1
nTPM: 58.2
2527 Male, age 74, both hemispheres 61.8
2082 Female, age 91, right hemisphere 59.2
1873 Female, age 85, both hemispheres 58.4
2045 Male, age 76, both hemispheres 57.3
2749 Male, age 80, left hemisphere 54.4
Hippocampus, CA2
nTPM: 57.9
1940 Female, age 85, left hemisphere 71.5
2113 Female, age 91, right hemisphere 62.1
2437 Female, age 94, left hemisphere 58.4
1892 Male, age 76, both hemispheres 54.3
1963 Male, age 80, left hemisphere 51.0
2249 Male, age 74, both hemispheres 50.2
Hippocampus, CA3
nTPM: 68.5
2861 Female, age 67, both hemispheres 90.0
2620 Female, age 94, left hemisphere 74.7
2436 Male, age 74, both hemispheres 66.3
2137 Male, age 80, left hemisphere 64.3
1891 Female, age 85, both hemispheres 62.4
1867 Male, age 76, both hemispheres 53.3
Parahippocampal cortex
nTPM: 66.6
2622 Female, age 67, right hemisphere 95.8
2245 Female, age 91, both hemispheres 72.3
2532 Female, age 72, left hemisphere 70.2
2692 Male, age 74, both hemispheres 69.8
2693 Female, age 94, both hemispheres 66.5
1933 Female, age 85, both hemispheres 61.4
2018 Male, age 76, both hemispheres 60.8
2250 Female, age 67, right hemisphere 60.7
1850 Male, age 80, both hemispheres 54.5
1990 Female, age 91, right hemisphere 54.1
Perirhinal gyrus
nTPM: 56.9
2848 Male, age 76, right hemisphere 68.4
1841 Female, age 85, right hemisphere 65.8
2521 Female, age 94, right hemisphere 55.6
1794 Male, age 80, right hemisphere 48.0
1847 Female, age 91, left hemisphere 46.8
Subiculum
nTPM: 63.4
2438 Female, age 94, left hemisphere 82.0
2619 Male, age 74, both hemispheres 63.3
2042 Male, age 76, both hemispheres 59.8
2729 Female, age 91, right hemisphere 59.4
1901 Male, age 80, both hemispheres 58.2
1977 Female, age 85, both hemispheres 58.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.7
Samples: 197

Max nTPM: 93.4
Min nTPM: 12.9
Std nTPM: 11.7
Median nTPM: 43.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 93.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 84.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 81.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 77.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 75.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 72.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 70.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 68.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 67.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 66.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 65.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 262.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 262.6
FF:10153-102I9 76 years, female 329.0
FF:10169-103B7 60 years, female 196.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.1
Pig sample Sample description nTPM
Subiculum
nTPM: 73.5
Samples: 4

Max nTPM: 82.2
Min nTPM: 67.5
Sample A Female 67.5
Sample B Female 73.3
Sample C Male 70.8
Sample D Male 82.2
Dorsal hippocampus
nTPM: 68.0
Samples: 4

Max nTPM: 83.6
Min nTPM: 54.0
Sample A Female 54.0
Sample B Female 64.0
Sample C Male 70.2
Sample D Male 83.6
Entorhinal cortex
nTPM: 74.1
Samples: 4

Max nTPM: 84.7
Min nTPM: 65.4
Sample A Female 75.0
Sample B Female 71.3
Sample C Male 65.4
Sample D Male 84.7
Ventral hippocampus
nTPM: 66.8
Samples: 4

Max nTPM: 74.4
Min nTPM: 52.0
Sample A Female 70.4
Sample B Female 74.4
Sample C Male 52.0
Sample D Male 70.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 26.0
Min nTPM: 12.3
Sample A Male 20.9
Sample B Male 26.0
Sample C Female 22.9
Sample D Female 12.3
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 31.5
Min nTPM: 13.8
Sample A Male 31.5
Sample B Male 27.9
Sample C Female 13.8
Sample D Female 24.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.1
70218944 Antisense, RP_050524_01_F10, Mouse strain C57BL/6J (56 days, male) 16.1

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