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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in granular layer:
Low
Cells in molecular layer:
Not detected
Purkinje cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1.2
nTPM
FANTOM5:
0.4
Scaled Tags Per Million
Mouse:
0.2
nTPM
Allen mouse:
0.3
Expression energy
CEREBELLUM - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA043651
Purkinje cells
High
Cells in granular layer
Low
Cells in molecular layer
Not detected
CEREBELLUM - HPA Brain RNA-seq
Max nTPM
1.2
Sample id
Sample description
nTPM
Cerebellar cortex nTPM: 0.8
2101
Male, age 74, right hemisphere
1.5
1768
Female, age 72, unknown
0.8
2003
Female, age 85, right hemisphere
0.7
2055
Female, age 91, right hemisphere
0.7
1769
Male, age 76, right hemisphere
0.6
1774
Male, age 80, left hemisphere
0.6
1788
Male, age 55, unknown
0.5
2006
Male, age 61, right hemisphere
0.5
Cerebellar nuclei nTPM: 0.6
2318
Male, age 74, left hemisphere
1.5
1966
Female, age 91, left hemisphere
0.7
2175
Male, age 61, right hemisphere
0.7
2177
Female, age 85, both hemispheres
0.6
2882
Male, age 76, left hemisphere
0.6
1879
Male, age 55, unknown
0.5
1871
Male, age 74, unknown
0.4
2005
Male, age 80, left hemisphere
0.3
2783
Female, age 72, unknown
0.3
Flocculonodular lobe nTPM: 0.9
1767
Male, age 76, left hemisphere
1.4
2176
Female, age 91, right hemisphere
1.4
1771
Male, age 80, left hemisphere
1.0
1835
Female, age 85, right hemisphere
0.8
2004
Male, age 61, right hemisphere
0.7
1792
Male, age 74, unknown
0.5
1765
Male, age 55, unknown
0.4
Vermis nTPM: 1.2
1766
Male, age 55, unknown
2.9
2834
Male, age 80, left hemisphere
1.8
1751
Male, age 74, right hemisphere
1.3
1770
Male, age 76, left hemisphere
1.2
1928
Female, age 72, unknown
1.0
1988
Female, age 85, left hemisphere
1.0
1778
Female, age 91, left hemisphere
0.9
1825
Male, age 74, unknown
0.6
2460
Male, age 61, both hemispheres
0.3
CEREBELLUM - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.2
Mouse sample
Sample description
nTPM
Cerebellum nTPM: 0.2
Samples: 4
Max nTPM: 0.5
Min nTPM: 0.0
Sample A
Male
0.1
Sample B
Male
0.1
Sample C
Female
0.0
Sample D
Female
0.5
CEREBELLUM - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
