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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
62.8
nTPM
Monaco:
108.9
nTPM
Schmiedel:
46.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.8
HPA sample
nTPM
gdT-cell nTPM: 29.9
Samples: 6
Max nTPM: 35.2
Min nTPM: 27.2
P10809_1007
27.2
P10809_1022
35.2
P10809_1041
30.4
P10809_1060
30.5
P10809_1077
27.3
P10809_1098
28.7
MAIT T-cell nTPM: 40.3
Samples: 6
Max nTPM: 50.9
Min nTPM: 35.2
P10809_1006
40.1
P10809_1024
50.9
P10809_1043
35.8
P10809_1062
37.5
P10809_1083
35.2
P10809_1097
42.5
Memory CD4 T-cell nTPM: 43.0
Samples: 6
Max nTPM: 50.3
Min nTPM: 37.9
P10809_1014
37.9
P10809_1026
40.5
P10809_1045
50.3
P10809_1064
38.8
P10809_1086
45.9
P10809_1113
44.3
Memory CD8 T-cell nTPM: 31.0
Samples: 5
Max nTPM: 34.3
Min nTPM: 28.2
P10809_1012
28.2
P10809_1027
32.1
P10809_1046
28.2
P10809_1065
32.4
P10809_1111
34.3
Naive CD4 T-cell nTPM: 49.3
Samples: 6
Max nTPM: 60.2
Min nTPM: 40.2
P10809_1015
45.1
P10809_1030
45.0
P10809_1049
49.5
P10809_1068
55.9
P10809_1085
60.2
P10809_1112
40.2
Naive CD8 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 47.9
Min nTPM: 33.1
P10809_1016
39.8
P10809_1031
39.1
P10809_1050
37.1
P10809_1069
33.1
P10809_1087
33.4
P10809_1110
47.9
T-reg nTPM: 62.8
Samples: 6
Max nTPM: 75.5
Min nTPM: 45.9
P10809_1018
47.2
P10809_1037
75.5
P10809_1056
73.7
P10809_1075
45.9
P10809_1094
68.4
P10809_1106
66.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.0
Samples: 4
Max nTPM: 101.7
Min nTPM: 80.5
RHH5202_R3573
101.7
RHH5230_R3602
82.4
RHH5259_R3631
83.4
RHH5288_R3660
80.5
Effector memory CD8 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 84.9
Min nTPM: 41.3
RHH5203_R3574
84.9
RHH5231_R3603
41.3
RHH5260_R3632
67.7
RHH5289_R3661
49.9
MAIT T-cell nTPM: 104.1
Samples: 4
Max nTPM: 121.9
Min nTPM: 74.1
RHH5233_R3605
116.8
RHH5205_R3576
121.9
RHH5262_R3634
103.7
RHH5297_R3663
74.1
Memory CD4 T-cell TFH nTPM: 88.7
Samples: 4
Max nTPM: 111.0
Min nTPM: 73.1
RHH5300_R3666
73.1
RHH5236_R3608
78.3
RHH5265_R3637
92.4
RHH5208_R3579
111.0
Memory CD4 T-cell Th1 nTPM: 71.0
Samples: 4
Max nTPM: 81.3
Min nTPM: 56.7
RHH5210_R3581
68.7
RHH5302_R3668
77.1
RHH5238_R3610
56.7
RHH5267_R3639
81.3
Memory CD4 T-cell Th1/Th17 nTPM: 87.2
Samples: 4
Max nTPM: 95.7
Min nTPM: 79.5
RHH5303_R3669
83.6
RHH5211_R3582
95.7
RHH5239_R3611
79.5
RHH5268_R3640
89.8
Memory CD4 T-cell Th17 nTPM: 91.9
Samples: 4
Max nTPM: 102.8
Min nTPM: 71.2
RHH5304_R3670
102.8
RHH5212_R3583
100.8
RHH5240_R3612
71.2
RHH5269_R3641
92.7
Memory CD4 T-cell Th2 nTPM: 99.5
Samples: 4
Max nTPM: 113.0
Min nTPM: 81.7
RHH5305_R3671
113.0
RHH5213_R3584
100.7
RHH5241_R3613
81.7
RHH5270_R3642
102.5
Naive CD4 T-cell nTPM: 94.4
Samples: 4
Max nTPM: 121.7
Min nTPM: 70.8
RHH5306_R3672
78.7
RHH5214_R3585
106.5
RHH5242_R3614
70.8
RHH5271_R3643
121.7
Naive CD8 T-cell nTPM: 108.9
Samples: 4
Max nTPM: 141.5
Min nTPM: 80.0
RHH5201_R3572
141.5
RHH5229_R3601
80.0
RHH5258_R3630
88.0
RHH5287_R3659
126.1
Non-Vd2 gdTCR nTPM: 50.4
Samples: 4
Max nTPM: 58.5
Min nTPM: 45.3
RHH5235_R3607
49.2
RHH5264_R3636
45.3
RHH5207_R3578
58.5
RHH5299_R3665
48.4
T-reg nTPM: 88.6
Samples: 4
Max nTPM: 100.8
Min nTPM: 71.6
RHH5301_R3667
84.4
RHH5237_R3609
71.6
RHH5266_R3638
100.8
RHH5209_R3580
97.5
Terminal effector memory CD4 T-cell nTPM: 61.5
Samples: 2
Max nTPM: 73.4
Min nTPM: 49.5
RHH5243_R3615
73.4
RHH5272_R3644
49.5
Terminal effector memory CD8 T-cell nTPM: 57.6
Samples: 4
Max nTPM: 67.2
Min nTPM: 41.7
RHH5232_R3604
67.2
RHH5204_R3575
41.7
RHH5261_R3633
66.6
RHH5296_R3662
54.7
Vd2 gdTCR nTPM: 75.3
Samples: 4
Max nTPM: 88.4
Min nTPM: 50.8
RHH5234_R3606
88.3
RHH5206_R3577
73.5
RHH5263_R3635
88.4
RHH5298_R3664
50.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
