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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.6
nTPM
Monaco:
25.7
nTPM
Schmiedel:
24.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.6
HPA sample
nTPM
gdT-cell nTPM: 29.2
Samples: 6
Max nTPM: 38.5
Min nTPM: 21.9
P10809_1007
21.9
P10809_1022
22.5
P10809_1041
23.5
P10809_1060
34.3
P10809_1077
38.5
P10809_1098
34.5
MAIT T-cell nTPM: 32.5
Samples: 6
Max nTPM: 56.2
Min nTPM: 17.6
P10809_1006
17.6
P10809_1024
56.2
P10809_1043
24.9
P10809_1062
28.3
P10809_1083
31.1
P10809_1097
36.9
Memory CD4 T-cell nTPM: 51.1
Samples: 6
Max nTPM: 66.0
Min nTPM: 41.3
P10809_1014
41.3
P10809_1026
50.1
P10809_1045
42.0
P10809_1064
44.5
P10809_1086
62.9
P10809_1113
66.0
Memory CD8 T-cell nTPM: 36.9
Samples: 5
Max nTPM: 47.2
Min nTPM: 23.0
P10809_1012
23.0
P10809_1027
40.5
P10809_1046
32.8
P10809_1065
41.0
P10809_1111
47.2
Naive CD4 T-cell nTPM: 43.1
Samples: 6
Max nTPM: 51.2
Min nTPM: 35.6
P10809_1015
35.6
P10809_1030
41.6
P10809_1049
46.6
P10809_1068
45.2
P10809_1085
38.2
P10809_1112
51.2
Naive CD8 T-cell nTPM: 36.7
Samples: 6
Max nTPM: 45.2
Min nTPM: 30.7
P10809_1016
34.3
P10809_1031
40.4
P10809_1050
34.9
P10809_1069
30.7
P10809_1087
45.2
P10809_1110
34.9
T-reg nTPM: 79.6
Samples: 6
Max nTPM: 108.8
Min nTPM: 57.1
P10809_1018
62.1
P10809_1037
108.8
P10809_1056
57.1
P10809_1075
66.1
P10809_1094
85.7
P10809_1106
97.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 15.8
Min nTPM: 5.1
RHH5202_R3573
6.1
RHH5230_R3602
5.1
RHH5259_R3631
10.2
RHH5288_R3660
15.8
Effector memory CD8 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 12.5
Min nTPM: 3.5
RHH5203_R3574
3.5
RHH5231_R3603
7.4
RHH5260_R3632
12.5
RHH5289_R3661
5.4
MAIT T-cell nTPM: 11.4
Samples: 4
Max nTPM: 17.6
Min nTPM: 8.9
RHH5233_R3605
9.5
RHH5205_R3576
8.9
RHH5262_R3634
9.6
RHH5297_R3663
17.6
Memory CD4 T-cell TFH nTPM: 18.7
Samples: 4
Max nTPM: 29.1
Min nTPM: 8.0
RHH5300_R3666
23.8
RHH5236_R3608
29.1
RHH5265_R3637
14.0
RHH5208_R3579
8.0
Memory CD4 T-cell Th1 nTPM: 15.7
Samples: 4
Max nTPM: 29.1
Min nTPM: 9.2
RHH5210_R3581
9.2
RHH5302_R3668
29.1
RHH5238_R3610
10.1
RHH5267_R3639
14.2
Memory CD4 T-cell Th1/Th17 nTPM: 12.7
Samples: 4
Max nTPM: 21.0
Min nTPM: 8.4
RHH5303_R3669
21.0
RHH5211_R3582
8.4
RHH5239_R3611
9.7
RHH5268_R3640
11.7
Memory CD4 T-cell Th17 nTPM: 17.2
Samples: 4
Max nTPM: 28.9
Min nTPM: 10.0
RHH5304_R3670
16.8
RHH5212_R3583
28.9
RHH5240_R3612
12.9
RHH5269_R3641
10.0
Memory CD4 T-cell Th2 nTPM: 18.9
Samples: 4
Max nTPM: 23.1
Min nTPM: 17.1
RHH5305_R3671
17.1
RHH5213_R3584
23.1
RHH5241_R3613
18.0
RHH5270_R3642
17.3
Naive CD4 T-cell nTPM: 12.8
Samples: 4
Max nTPM: 19.0
Min nTPM: 6.7
RHH5306_R3672
16.5
RHH5214_R3585
19.0
RHH5242_R3614
6.7
RHH5271_R3643
9.0
Naive CD8 T-cell nTPM: 8.1
Samples: 4
Max nTPM: 12.5
Min nTPM: 4.7
RHH5201_R3572
4.7
RHH5229_R3601
8.6
RHH5258_R3630
12.5
RHH5287_R3659
6.6
Non-Vd2 gdTCR nTPM: 12.7
Samples: 4
Max nTPM: 17.6
Min nTPM: 8.1
RHH5235_R3607
10.4
RHH5264_R3636
17.6
RHH5207_R3578
8.1
RHH5299_R3665
14.8
T-reg nTPM: 25.7
Samples: 4
Max nTPM: 39.4
Min nTPM: 16.3
RHH5301_R3667
39.4
RHH5237_R3609
28.6
RHH5266_R3638
16.3
RHH5209_R3580
18.4
Terminal effector memory CD4 T-cell nTPM: 10.5
Samples: 2
Max nTPM: 14.4
Min nTPM: 6.5
RHH5243_R3615
6.5
RHH5272_R3644
14.4
Terminal effector memory CD8 T-cell nTPM: 16.2
Samples: 4
Max nTPM: 22.1
Min nTPM: 8.7
RHH5232_R3604
12.3
RHH5204_R3575
21.8
RHH5261_R3633
8.7
RHH5296_R3662
22.1
Vd2 gdTCR nTPM: 11.7
Samples: 4
Max nTPM: 22.9
Min nTPM: 6.8
RHH5234_R3606
7.2
RHH5206_R3577
9.7
RHH5263_R3635
6.8
RHH5298_R3664
22.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
