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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.1
nTPM
Monaco:
81.6
nTPM
Schmiedel:
113.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.1
HPA sample
nTPM
gdT-cell nTPM: 47.7
Samples: 6
Max nTPM: 58.5
Min nTPM: 38.6
P10809_1007
41.4
P10809_1022
51.6
P10809_1041
53.6
P10809_1060
38.6
P10809_1077
58.5
P10809_1098
42.4
MAIT T-cell nTPM: 61.1
Samples: 6
Max nTPM: 69.7
Min nTPM: 52.6
P10809_1006
52.6
P10809_1024
58.8
P10809_1043
68.2
P10809_1062
64.4
P10809_1083
52.9
P10809_1097
69.7
Memory CD4 T-cell nTPM: 49.2
Samples: 6
Max nTPM: 57.4
Min nTPM: 38.8
P10809_1014
43.7
P10809_1026
38.8
P10809_1045
52.6
P10809_1064
54.1
P10809_1086
57.4
P10809_1113
48.3
Memory CD8 T-cell nTPM: 52.5
Samples: 5
Max nTPM: 59.0
Min nTPM: 47.5
P10809_1012
47.5
P10809_1027
51.2
P10809_1046
55.2
P10809_1065
59.0
P10809_1111
49.4
Naive CD4 T-cell nTPM: 39.5
Samples: 6
Max nTPM: 46.5
Min nTPM: 35.5
P10809_1015
46.5
P10809_1030
40.2
P10809_1049
35.5
P10809_1068
37.1
P10809_1085
41.0
P10809_1112
36.6
Naive CD8 T-cell nTPM: 43.4
Samples: 6
Max nTPM: 55.7
Min nTPM: 33.6
P10809_1016
35.2
P10809_1031
38.9
P10809_1050
48.3
P10809_1069
48.8
P10809_1087
55.7
P10809_1110
33.6
T-reg nTPM: 49.3
Samples: 6
Max nTPM: 62.3
Min nTPM: 42.4
P10809_1018
53.8
P10809_1037
46.9
P10809_1056
43.0
P10809_1075
62.3
P10809_1094
42.4
P10809_1106
47.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 66.1
Min nTPM: 39.7
RHH5202_R3573
46.1
RHH5230_R3602
64.4
RHH5259_R3631
39.7
RHH5288_R3660
66.1
Effector memory CD8 T-cell nTPM: 70.3
Samples: 4
Max nTPM: 76.1
Min nTPM: 60.9
RHH5203_R3574
73.1
RHH5231_R3603
76.1
RHH5260_R3632
71.1
RHH5289_R3661
60.9
MAIT T-cell nTPM: 78.0
Samples: 4
Max nTPM: 91.3
Min nTPM: 61.7
RHH5233_R3605
77.9
RHH5205_R3576
61.7
RHH5262_R3634
81.1
RHH5297_R3663
91.3
Memory CD4 T-cell TFH nTPM: 57.6
Samples: 4
Max nTPM: 69.3
Min nTPM: 47.4
RHH5300_R3666
55.2
RHH5236_R3608
58.4
RHH5265_R3637
69.3
RHH5208_R3579
47.4
Memory CD4 T-cell Th1 nTPM: 58.5
Samples: 4
Max nTPM: 69.2
Min nTPM: 45.9
RHH5210_R3581
56.5
RHH5302_R3668
62.2
RHH5238_R3610
45.9
RHH5267_R3639
69.2
Memory CD4 T-cell Th1/Th17 nTPM: 62.9
Samples: 4
Max nTPM: 82.3
Min nTPM: 47.3
RHH5303_R3669
82.3
RHH5211_R3582
47.3
RHH5239_R3611
60.5
RHH5268_R3640
61.5
Memory CD4 T-cell Th17 nTPM: 67.4
Samples: 4
Max nTPM: 103.0
Min nTPM: 48.0
RHH5304_R3670
62.9
RHH5212_R3583
48.0
RHH5240_R3612
103.0
RHH5269_R3641
55.8
Memory CD4 T-cell Th2 nTPM: 78.3
Samples: 4
Max nTPM: 107.2
Min nTPM: 55.1
RHH5305_R3671
82.2
RHH5213_R3584
55.1
RHH5241_R3613
107.2
RHH5270_R3642
68.5
Naive CD4 T-cell nTPM: 53.6
Samples: 4
Max nTPM: 61.7
Min nTPM: 36.4
RHH5306_R3672
61.7
RHH5214_R3585
36.4
RHH5242_R3614
55.2
RHH5271_R3643
61.2
Naive CD8 T-cell nTPM: 42.6
Samples: 4
Max nTPM: 52.4
Min nTPM: 23.6
RHH5201_R3572
23.6
RHH5229_R3601
44.9
RHH5258_R3630
49.3
RHH5287_R3659
52.4
Non-Vd2 gdTCR nTPM: 76.7
Samples: 4
Max nTPM: 84.0
Min nTPM: 62.2
RHH5235_R3607
62.2
RHH5264_R3636
84.0
RHH5207_R3578
79.8
RHH5299_R3665
80.8
T-reg nTPM: 58.7
Samples: 4
Max nTPM: 69.8
Min nTPM: 47.2
RHH5301_R3667
60.0
RHH5237_R3609
57.6
RHH5266_R3638
69.8
RHH5209_R3580
47.2
Terminal effector memory CD4 T-cell nTPM: 81.6
Samples: 2
Max nTPM: 88.2
Min nTPM: 74.9
RHH5243_R3615
74.9
RHH5272_R3644
88.2
Terminal effector memory CD8 T-cell nTPM: 74.5
Samples: 4
Max nTPM: 84.2
Min nTPM: 60.7
RHH5232_R3604
60.7
RHH5204_R3575
84.2
RHH5261_R3633
79.6
RHH5296_R3662
73.3
Vd2 gdTCR nTPM: 68.4
Samples: 4
Max nTPM: 74.8
Min nTPM: 60.8
RHH5234_R3606
74.0
RHH5206_R3577
60.8
RHH5263_R3635
74.8
RHH5298_R3664
63.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
