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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
149.4
nTPM
Monaco:
197.5
nTPM
Schmiedel:
40.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
149.4
HPA sample
nTPM
gdT-cell nTPM: 76.7
Samples: 6
Max nTPM: 91.4
Min nTPM: 58.6
P10809_1007
58.6
P10809_1022
91.4
P10809_1041
90.2
P10809_1060
71.7
P10809_1077
71.2
P10809_1098
77.3
MAIT T-cell nTPM: 104.8
Samples: 6
Max nTPM: 140.8
Min nTPM: 83.6
P10809_1006
89.9
P10809_1024
140.8
P10809_1043
92.0
P10809_1062
107.7
P10809_1083
114.5
P10809_1097
83.6
Memory CD4 T-cell nTPM: 98.2
Samples: 6
Max nTPM: 106.3
Min nTPM: 87.6
P10809_1014
95.3
P10809_1026
87.6
P10809_1045
95.4
P10809_1064
99.7
P10809_1086
104.8
P10809_1113
106.3
Memory CD8 T-cell nTPM: 83.6
Samples: 5
Max nTPM: 103.1
Min nTPM: 71.7
P10809_1012
71.7
P10809_1027
84.6
P10809_1046
80.9
P10809_1065
77.7
P10809_1111
103.1
Naive CD4 T-cell nTPM: 51.9
Samples: 6
Max nTPM: 63.4
Min nTPM: 41.4
P10809_1015
41.4
P10809_1030
54.7
P10809_1049
48.8
P10809_1068
45.6
P10809_1085
63.4
P10809_1112
57.7
Naive CD8 T-cell nTPM: 55.3
Samples: 6
Max nTPM: 77.1
Min nTPM: 38.6
P10809_1016
38.6
P10809_1031
47.1
P10809_1050
52.3
P10809_1069
68.0
P10809_1087
77.1
P10809_1110
48.8
T-reg nTPM: 149.4
Samples: 6
Max nTPM: 167.0
Min nTPM: 137.0
P10809_1018
137.0
P10809_1037
144.1
P10809_1056
167.0
P10809_1075
141.0
P10809_1094
153.5
P10809_1106
154.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
197.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 147.5
Samples: 4
Max nTPM: 188.5
Min nTPM: 117.8
RHH5202_R3573
188.5
RHH5230_R3602
152.1
RHH5259_R3631
117.8
RHH5288_R3660
131.5
Effector memory CD8 T-cell nTPM: 197.5
Samples: 4
Max nTPM: 260.0
Min nTPM: 138.7
RHH5203_R3574
260.0
RHH5231_R3603
210.1
RHH5260_R3632
138.7
RHH5289_R3661
181.1
MAIT T-cell nTPM: 180.6
Samples: 4
Max nTPM: 221.0
Min nTPM: 144.1
RHH5233_R3605
193.3
RHH5205_R3576
221.0
RHH5262_R3634
164.0
RHH5297_R3663
144.1
Memory CD4 T-cell TFH nTPM: 136.1
Samples: 4
Max nTPM: 147.4
Min nTPM: 120.9
RHH5300_R3666
120.9
RHH5236_R3608
142.9
RHH5265_R3637
147.4
RHH5208_R3579
133.3
Memory CD4 T-cell Th1 nTPM: 152.6
Samples: 4
Max nTPM: 177.5
Min nTPM: 109.7
RHH5210_R3581
151.5
RHH5302_R3668
177.5
RHH5238_R3610
109.7
RHH5267_R3639
171.7
Memory CD4 T-cell Th1/Th17 nTPM: 187.6
Samples: 4
Max nTPM: 246.6
Min nTPM: 149.9
RHH5303_R3669
194.3
RHH5211_R3582
246.6
RHH5239_R3611
149.9
RHH5268_R3640
159.7
Memory CD4 T-cell Th17 nTPM: 179.6
Samples: 4
Max nTPM: 206.6
Min nTPM: 144.4
RHH5304_R3670
178.4
RHH5212_R3583
189.1
RHH5240_R3612
206.6
RHH5269_R3641
144.4
Memory CD4 T-cell Th2 nTPM: 176.4
Samples: 4
Max nTPM: 218.0
Min nTPM: 142.0
RHH5305_R3671
157.7
RHH5213_R3584
218.0
RHH5241_R3613
187.9
RHH5270_R3642
142.0
Naive CD4 T-cell nTPM: 94.3
Samples: 4
Max nTPM: 119.1
Min nTPM: 77.2
RHH5306_R3672
77.2
RHH5214_R3585
119.1
RHH5242_R3614
89.3
RHH5271_R3643
91.6
Naive CD8 T-cell nTPM: 77.3
Samples: 4
Max nTPM: 105.8
Min nTPM: 63.4
RHH5201_R3572
105.8
RHH5229_R3601
64.6
RHH5258_R3630
75.3
RHH5287_R3659
63.4
Non-Vd2 gdTCR nTPM: 117.8
Samples: 4
Max nTPM: 160.7
Min nTPM: 93.1
RHH5235_R3607
116.9
RHH5264_R3636
100.3
RHH5207_R3578
160.7
RHH5299_R3665
93.1
T-reg nTPM: 144.2
Samples: 4
Max nTPM: 202.8
Min nTPM: 111.4
RHH5301_R3667
111.4
RHH5237_R3609
202.8
RHH5266_R3638
115.7
RHH5209_R3580
146.7
Terminal effector memory CD4 T-cell nTPM: 127.7
Samples: 2
Max nTPM: 132.7
Min nTPM: 122.6
RHH5243_R3615
122.6
RHH5272_R3644
132.7
Terminal effector memory CD8 T-cell nTPM: 132.4
Samples: 4
Max nTPM: 143.4
Min nTPM: 127.9
RHH5232_R3604
143.4
RHH5204_R3575
129.4
RHH5261_R3633
127.9
RHH5296_R3662
128.8
Vd2 gdTCR nTPM: 152.5
Samples: 4
Max nTPM: 186.0
Min nTPM: 106.9
RHH5234_R3606
186.0
RHH5206_R3577
148.8
RHH5263_R3635
168.4
RHH5298_R3664
106.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
