HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:17.0 nTPM
HPA Brain:42.3 nTPM
GTEx:17.0 nTPM
FANTOM5:125.6 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:33.1 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036408Antibody HPA036409Antibody CAB033786
Glial cells Not detectedHighLow
Neuronal cells MediumMediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.3
Sample id Sample description nTPM
Hippocampus
nTPM: 33.0
1898 Male, age 80, left hemisphere 49.5
2621 Female, age 67, right hemisphere 34.2
1855 Male, age 76, left hemisphere 29.9
2529 Female, age 94, left hemisphere 28.8
2148 Female, age 91, left hemisphere 28.0
1911 Female, age 85, right hemisphere 27.6
Dentate gyrus
nTPM: 33.2
1927 Female, age 91, both hemispheres 41.0
2010 Male, age 76, both hemispheres 38.2
2528 Male, age 74, both hemispheres 33.7
2246 Female, age 85, both hemispheres 30.3
2530 Female, age 94, left hemisphere 29.0
2531 Female, age 67, both hemispheres 27.1
Entorhinal gyrus
nTPM: 33.5
1938 Female, age 85, left hemisphere 39.6
2764 Male, age 80, right hemisphere 39.0
1787 Male, age 76, left hemisphere 33.5
2117 Female, age 91, right hemisphere 32.7
2613 Female, age 94, left hemisphere 29.7
2686 Male, age 75, right hemisphere 26.2
Hippocampus, CA1
nTPM: 38.2
2749 Male, age 80, left hemisphere 60.9
1873 Female, age 85, both hemispheres 37.2
2527 Male, age 74, both hemispheres 36.8
2045 Male, age 76, both hemispheres 31.6
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 34.9
1892 Male, age 76, both hemispheres 46.5
1963 Male, age 80, left hemisphere 45.9
2249 Male, age 74, both hemispheres 37.5
2113 Female, age 91, right hemisphere 28.5
1940 Female, age 85, left hemisphere 25.7
2437 Female, age 94, left hemisphere 25.4
Hippocampus, CA3
nTPM: 34.3
2436 Male, age 74, both hemispheres 44.2
2137 Male, age 80, left hemisphere 43.7
1867 Male, age 76, both hemispheres 36.4
1891 Female, age 85, both hemispheres 33.2
2620 Female, age 94, left hemisphere 24.2
2861 Female, age 67, both hemispheres 23.9
Parahippocampal cortex
nTPM: 33.6
1850 Male, age 80, both hemispheres 49.0
1990 Female, age 91, right hemisphere 38.7
1933 Female, age 85, both hemispheres 34.6
2250 Female, age 67, right hemisphere 32.9
2245 Female, age 91, both hemispheres 32.6
2018 Male, age 76, both hemispheres 31.0
2532 Female, age 72, left hemisphere 30.9
2692 Male, age 74, both hemispheres 30.6
2693 Female, age 94, both hemispheres 29.9
2622 Female, age 67, right hemisphere 26.0
Perirhinal gyrus
nTPM: 42.3
1847 Female, age 91, left hemisphere 52.4
1794 Male, age 80, right hemisphere 48.2
1841 Female, age 85, right hemisphere 42.1
2521 Female, age 94, right hemisphere 37.7
2848 Male, age 76, right hemisphere 31.3
Subiculum
nTPM: 32.8
1977 Female, age 85, both hemispheres 39.3
1901 Male, age 80, both hemispheres 38.7
2619 Male, age 74, both hemispheres 34.4
2438 Female, age 94, left hemisphere 29.8
2729 Female, age 91, right hemisphere 28.4
2042 Male, age 76, both hemispheres 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.0
Samples: 197

Max nTPM: 30.8
Min nTPM: 10.3
Std nTPM: 4.1
Median nTPM: 16.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 27.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 27.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 27.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 26.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 26.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 26.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 24.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 24.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.6
FF:10169-103B7 60 years, female 171.3
FF:10153-102I9 76 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.5
Pig sample Sample description nTPM
Subiculum
nTPM: 37.8
Samples: 4

Max nTPM: 42.6
Min nTPM: 34.5
Sample A Female 42.6
Sample B Female 34.5
Sample C Male 36.5
Sample D Male 37.7
Dorsal hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 46.3
Min nTPM: 35.2
Sample A Female 46.3
Sample B Female 40.7
Sample C Male 43.9
Sample D Male 35.2
Entorhinal cortex
nTPM: 40.8
Samples: 4

Max nTPM: 49.5
Min nTPM: 36.0
Sample A Female 40.0
Sample B Female 49.5
Sample C Male 37.5
Sample D Male 36.0
Ventral hippocampus
nTPM: 38.3
Samples: 4

Max nTPM: 49.6
Min nTPM: 34.3
Sample A Female 49.6
Sample B Female 34.3
Sample C Male 34.5
Sample D Male 34.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 34.8
Min nTPM: 29.1
Sample A Male 30.1
Sample B Male 29.1
Sample C Female 32.4
Sample D Female 34.8
Hippocampal formation
nTPM: 33.1
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.8
Sample A Male 28.8
Sample B Male 35.0
Sample C Female 36.4
Sample D Female 32.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
70546087 Antisense, RP_050623_03_E12, Mouse strain C57BL/6J (56 days, male) 9.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org