HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.2 nTPM
HPA Brain:35.5 nTPM
GTEx:22.2 nTPM
FANTOM5:44.4 Scaled Tags Per Million
Pig:41.7 nTPM
Mouse:48.1 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031020Antibody HPA031021
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
2621 Female, age 67, right hemisphere 36.2
2529 Female, age 94, left hemisphere 32.1
1911 Female, age 85, right hemisphere 29.1
1855 Male, age 76, left hemisphere 28.4
2148 Female, age 91, left hemisphere 28.3
1898 Male, age 80, left hemisphere 27.7
Dentate gyrus
nTPM: 30.3
2531 Female, age 67, both hemispheres 35.2
2246 Female, age 85, both hemispheres 34.6
1927 Female, age 91, both hemispheres 31.6
2010 Male, age 76, both hemispheres 30.1
2530 Female, age 94, left hemisphere 29.6
2528 Male, age 74, both hemispheres 20.9
Entorhinal gyrus
nTPM: 32.4
2686 Male, age 75, right hemisphere 41.9
2613 Female, age 94, left hemisphere 39.9
1787 Male, age 76, left hemisphere 32.3
1938 Female, age 85, left hemisphere 31.3
2764 Male, age 80, right hemisphere 28.9
2117 Female, age 91, right hemisphere 20.0
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 46.9
2082 Female, age 91, right hemisphere 35.1
1873 Female, age 85, both hemispheres 33.5
2045 Male, age 76, both hemispheres 32.5
2527 Male, age 74, both hemispheres 29.4
Hippocampus, CA2
nTPM: 30.0
1892 Male, age 76, both hemispheres 33.1
2437 Female, age 94, left hemisphere 32.3
2249 Male, age 74, both hemispheres 30.2
2113 Female, age 91, right hemisphere 29.4
1963 Male, age 80, left hemisphere 28.0
1940 Female, age 85, left hemisphere 26.9
Hippocampus, CA3
nTPM: 33.5
2436 Male, age 74, both hemispheres 47.3
2137 Male, age 80, left hemisphere 42.5
2861 Female, age 67, both hemispheres 31.0
2620 Female, age 94, left hemisphere 28.4
1867 Male, age 76, both hemispheres 28.1
1891 Female, age 85, both hemispheres 24.0
Parahippocampal cortex
nTPM: 32.3
2622 Female, age 67, right hemisphere 39.6
2250 Female, age 67, right hemisphere 35.5
2245 Female, age 91, both hemispheres 35.4
2693 Female, age 94, both hemispheres 33.9
1990 Female, age 91, right hemisphere 32.3
2532 Female, age 72, left hemisphere 31.9
1933 Female, age 85, both hemispheres 30.8
2692 Male, age 74, both hemispheres 28.1
2018 Male, age 76, both hemispheres 27.7
1850 Male, age 80, both hemispheres 27.3
Perirhinal gyrus
nTPM: 30.9
1847 Female, age 91, left hemisphere 34.4
2848 Male, age 76, right hemisphere 32.8
1794 Male, age 80, right hemisphere 30.2
1841 Female, age 85, right hemisphere 29.3
2521 Female, age 94, right hemisphere 27.7
Subiculum
nTPM: 29.3
2438 Female, age 94, left hemisphere 41.7
1901 Male, age 80, both hemispheres 30.4
1977 Female, age 85, both hemispheres 29.5
2619 Male, age 74, both hemispheres 26.5
2042 Male, age 76, both hemispheres 24.2
2729 Female, age 91, right hemisphere 23.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 43.3
Min nTPM: 5.2
Std nTPM: 6.7
Median nTPM: 21.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 43.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 41.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 40.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 39.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 38.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 36.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 35.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 33.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 33.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.4
FF:10153-102I9 76 years, female 45.3
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.4
Samples: 4

Max nTPM: 40.9
Min nTPM: 31.8
Sample A Female 40.9
Sample B Female 31.8
Sample C Male 36.5
Sample D Male 36.2
Dorsal hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 41.8
Min nTPM: 31.6
Sample A Female 41.8
Sample B Female 41.8
Sample C Male 31.6
Sample D Male 38.5
Entorhinal cortex
nTPM: 41.7
Samples: 4

Max nTPM: 45.8
Min nTPM: 38.3
Sample A Female 45.8
Sample B Female 39.2
Sample C Male 38.3
Sample D Male 43.5
Ventral hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 45.3
Min nTPM: 31.2
Sample A Female 36.7
Sample B Female 31.2
Sample C Male 44.2
Sample D Male 45.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 42.9
Min nTPM: 36.5
Sample A Male 40.4
Sample B Male 36.5
Sample C Female 41.3
Sample D Female 42.9
Hippocampal formation
nTPM: 48.1
Samples: 4

Max nTPM: 53.5
Min nTPM: 43.5
Sample A Male 43.5
Sample B Male 48.7
Sample C Female 53.5
Sample D Female 46.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
68191396 Antisense, RP_041129_01_B01, Mouse strain C57BL/6J (56 days, male) 8.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org