HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:4.1 nTPM
HPA Brain:14.2 nTPM
GTEx:4.1 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Pig:3.2 nTPM
Mouse:2.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000813
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Hippocampus
nTPM: 12.8
1911 Female, age 85, right hemisphere 13.9
2148 Female, age 91, left hemisphere 13.1
1898 Male, age 80, left hemisphere 12.7
2621 Female, age 67, right hemisphere 12.7
1855 Male, age 76, left hemisphere 12.6
2529 Female, age 94, left hemisphere 12.0
Dentate gyrus
nTPM: 13.2
2531 Female, age 67, both hemispheres 14.7
2246 Female, age 85, both hemispheres 14.5
1927 Female, age 91, both hemispheres 13.9
2010 Male, age 76, both hemispheres 12.8
2528 Male, age 74, both hemispheres 12.0
2530 Female, age 94, left hemisphere 11.4
Entorhinal gyrus
nTPM: 13.1
2686 Male, age 75, right hemisphere 14.2
1938 Female, age 85, left hemisphere 14.0
2613 Female, age 94, left hemisphere 13.1
1787 Male, age 76, left hemisphere 12.6
2117 Female, age 91, right hemisphere 12.3
2764 Male, age 80, right hemisphere 12.3
Hippocampus, CA1
nTPM: 13.6
1873 Female, age 85, both hemispheres 14.0
2045 Male, age 76, both hemispheres 13.5
2082 Female, age 91, right hemisphere 13.5
2527 Male, age 74, both hemispheres 13.4
2749 Male, age 80, left hemisphere 13.4
Hippocampus, CA2
nTPM: 12.9
1940 Female, age 85, left hemisphere 13.5
2113 Female, age 91, right hemisphere 13.4
1892 Male, age 76, both hemispheres 12.8
2249 Male, age 74, both hemispheres 12.8
2437 Female, age 94, left hemisphere 12.7
1963 Male, age 80, left hemisphere 12.0
Hippocampus, CA3
nTPM: 13.8
2620 Female, age 94, left hemisphere 15.3
1891 Female, age 85, both hemispheres 14.9
2137 Male, age 80, left hemisphere 14.0
2861 Female, age 67, both hemispheres 13.9
1867 Male, age 76, both hemispheres 12.7
2436 Male, age 74, both hemispheres 11.9
Parahippocampal cortex
nTPM: 14.2
1850 Male, age 80, both hemispheres 16.0
2693 Female, age 94, both hemispheres 16.0
2532 Female, age 72, left hemisphere 14.7
1933 Female, age 85, both hemispheres 14.5
2692 Male, age 74, both hemispheres 14.3
2622 Female, age 67, right hemisphere 14.1
2250 Female, age 67, right hemisphere 13.8
2018 Male, age 76, both hemispheres 13.1
2245 Female, age 91, both hemispheres 12.7
1990 Female, age 91, right hemisphere 12.6
Perirhinal gyrus
nTPM: 14.1
1841 Female, age 85, right hemisphere 15.7
2848 Male, age 76, right hemisphere 14.7
1794 Male, age 80, right hemisphere 14.0
2521 Female, age 94, right hemisphere 13.3
1847 Female, age 91, left hemisphere 13.0
Subiculum
nTPM: 13.2
1901 Male, age 80, both hemispheres 14.0
2438 Female, age 94, left hemisphere 13.6
1977 Female, age 85, both hemispheres 13.3
2042 Male, age 76, both hemispheres 13.3
2619 Male, age 74, both hemispheres 12.5
2729 Female, age 91, right hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.1
Samples: 197

Max nTPM: 7.1
Min nTPM: 2.3
Std nTPM: 0.7
Median nTPM: 4.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 7.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 6.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 6.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 5.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 5.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 5.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 5.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 5.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 5.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 5.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 5.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10153-102I9 76 years, female 10.1
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.2
Pig sample Sample description nTPM
Subiculum
nTPM: 2.6
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.0
Sample A Female 2.6
Sample B Female 3.0
Sample C Male 2.0
Sample D Male 2.7
Dorsal hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 3.9
Min nTPM: 2.4
Sample A Female 3.9
Sample B Female 3.5
Sample C Male 3.1
Sample D Male 2.4
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 4.0
Min nTPM: 1.9
Sample A Female 2.7
Sample B Female 4.0
Sample C Male 2.5
Sample D Male 1.9
Ventral hippocampus
nTPM: 2.5
Samples: 4

Max nTPM: 2.8
Min nTPM: 2.0
Sample A Female 2.8
Sample B Female 2.5
Sample C Male 2.0
Sample D Male 2.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.5
Sample A Male 2.1
Sample B Male 1.5
Sample C Female 2.3
Sample D Female 2.1
Hippocampal formation
nTPM: 2.2
Samples: 4

Max nTPM: 2.2
Min nTPM: 2.0
Sample A Male 2.2
Sample B Male 2.0
Sample C Female 2.2
Sample D Female 2.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69854734 Antisense, RP_050324_04_C09, Mouse strain C57BL/6J (56 days, male) 0.6

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