HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.7 nTPM
HPA Brain:53.0 nTPM
GTEx:16.7 nTPM
FANTOM5:60.6 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:7.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003086
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.0
Sample id Sample description nTPM
Hippocampus
nTPM: 53.0
1855 Male, age 76, left hemisphere 59.3
2529 Female, age 94, left hemisphere 57.0
1898 Male, age 80, left hemisphere 55.4
1911 Female, age 85, right hemisphere 54.7
2148 Female, age 91, left hemisphere 51.5
2621 Female, age 67, right hemisphere 39.9
Dentate gyrus
nTPM: 47.3
2528 Male, age 74, both hemispheres 61.9
2010 Male, age 76, both hemispheres 54.0
2246 Female, age 85, both hemispheres 49.2
2530 Female, age 94, left hemisphere 49.0
1927 Female, age 91, both hemispheres 35.1
2531 Female, age 67, both hemispheres 34.2
Entorhinal gyrus
nTPM: 42.3
2117 Female, age 91, right hemisphere 57.7
1938 Female, age 85, left hemisphere 48.9
1787 Male, age 76, left hemisphere 45.6
2686 Male, age 75, right hemisphere 40.3
2764 Male, age 80, right hemisphere 33.7
2613 Female, age 94, left hemisphere 27.9
Hippocampus, CA1
nTPM: 47.7
2527 Male, age 74, both hemispheres 61.8
1873 Female, age 85, both hemispheres 58.1
2082 Female, age 91, right hemisphere 51.6
2045 Male, age 76, both hemispheres 44.5
2749 Male, age 80, left hemisphere 22.5
Hippocampus, CA2
nTPM: 43.2
2249 Male, age 74, both hemispheres 53.2
2113 Female, age 91, right hemisphere 50.3
1940 Female, age 85, left hemisphere 46.3
1963 Male, age 80, left hemisphere 45.1
2437 Female, age 94, left hemisphere 38.2
1892 Male, age 76, both hemispheres 26.3
Hippocampus, CA3
nTPM: 40.7
1891 Female, age 85, both hemispheres 49.7
2861 Female, age 67, both hemispheres 46.3
2436 Male, age 74, both hemispheres 44.4
2620 Female, age 94, left hemisphere 41.8
1867 Male, age 76, both hemispheres 34.0
2137 Male, age 80, left hemisphere 27.8
Parahippocampal cortex
nTPM: 41.4
2692 Male, age 74, both hemispheres 61.5
2622 Female, age 67, right hemisphere 48.0
2250 Female, age 67, right hemisphere 44.9
1933 Female, age 85, both hemispheres 44.6
1850 Male, age 80, both hemispheres 40.6
1990 Female, age 91, right hemisphere 40.4
2018 Male, age 76, both hemispheres 40.3
2245 Female, age 91, both hemispheres 33.7
2693 Female, age 94, both hemispheres 32.8
2532 Female, age 72, left hemisphere 27.2
Perirhinal gyrus
nTPM: 37.8
1847 Female, age 91, left hemisphere 41.1
2521 Female, age 94, right hemisphere 39.4
1794 Male, age 80, right hemisphere 38.2
1841 Female, age 85, right hemisphere 36.0
2848 Male, age 76, right hemisphere 34.3
Subiculum
nTPM: 49.1
2729 Female, age 91, right hemisphere 68.7
2619 Male, age 74, both hemispheres 62.0
2042 Male, age 76, both hemispheres 45.9
2438 Female, age 94, left hemisphere 43.9
1977 Female, age 85, both hemispheres 37.8
1901 Male, age 80, both hemispheres 36.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 47.4
Min nTPM: 4.3
Std nTPM: 7.3
Median nTPM: 15.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 47.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 41.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 37.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 36.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 33.8
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 33.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 33.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 29.6
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 29.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 29.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.6
FF:10153-102I9 76 years, female 85.9
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 23.4
Min nTPM: 16.2
Sample A Female 23.4
Sample B Female 21.5
Sample C Male 20.0
Sample D Male 16.2
Dorsal hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 10.8
Sample A Female 16.6
Sample B Female 14.7
Sample C Male 14.9
Sample D Male 10.8
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.6
Sample A Female 9.8
Sample B Female 7.4
Sample C Male 10.0
Sample D Male 6.6
Ventral hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 20.6
Min nTPM: 11.1
Sample A Female 17.7
Sample B Female 15.0
Sample C Male 20.6
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.7
Sample A Male 8.4
Sample B Male 5.9
Sample C Female 5.9
Sample D Female 5.7
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 8.5
Sample C Female 6.6
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70717363 Antisense, RP_050414_03_D08, Mouse strain C57BL/6J (56 days, male) 0.1

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