HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.1 nTPM
HPA Brain:16.8 nTPM
GTEx:6.1 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:8.0 nTPM
Mouse:39.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044348
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.7
1911 Female, age 85, right hemisphere 17.7
2148 Female, age 91, left hemisphere 17.2
1855 Male, age 76, left hemisphere 17.0
2621 Female, age 67, right hemisphere 16.8
2529 Female, age 94, left hemisphere 16.2
1898 Male, age 80, left hemisphere 15.3
Dentate gyrus
nTPM: 16.8
2530 Female, age 94, left hemisphere 18.0
2010 Male, age 76, both hemispheres 17.8
2246 Female, age 85, both hemispheres 17.0
2531 Female, age 67, both hemispheres 17.0
1927 Female, age 91, both hemispheres 16.1
2528 Male, age 74, both hemispheres 14.9
Entorhinal gyrus
nTPM: 16.7
2613 Female, age 94, left hemisphere 18.5
1787 Male, age 76, left hemisphere 17.5
2686 Male, age 75, right hemisphere 16.9
1938 Female, age 85, left hemisphere 16.3
2764 Male, age 80, right hemisphere 16.0
2117 Female, age 91, right hemisphere 15.2
Hippocampus, CA1
nTPM: 16.7
2749 Male, age 80, left hemisphere 18.1
2045 Male, age 76, both hemispheres 17.2
2527 Male, age 74, both hemispheres 17.0
1873 Female, age 85, both hemispheres 15.7
2082 Female, age 91, right hemisphere 15.4
Hippocampus, CA2
nTPM: 16.5
1940 Female, age 85, left hemisphere 17.9
1892 Male, age 76, both hemispheres 17.0
1963 Male, age 80, left hemisphere 17.0
2437 Female, age 94, left hemisphere 16.9
2113 Female, age 91, right hemisphere 15.9
2249 Male, age 74, both hemispheres 14.2
Hippocampus, CA3
nTPM: 16.1
2861 Female, age 67, both hemispheres 18.5
2620 Female, age 94, left hemisphere 17.3
2137 Male, age 80, left hemisphere 16.8
1891 Female, age 85, both hemispheres 16.4
1867 Male, age 76, both hemispheres 15.7
2436 Male, age 74, both hemispheres 12.1
Parahippocampal cortex
nTPM: 16.7
2532 Female, age 72, left hemisphere 17.8
2245 Female, age 91, both hemispheres 17.6
2622 Female, age 67, right hemisphere 17.5
1933 Female, age 85, both hemispheres 17.2
2692 Male, age 74, both hemispheres 17.2
2018 Male, age 76, both hemispheres 16.5
2250 Female, age 67, right hemisphere 16.3
1850 Male, age 80, both hemispheres 15.9
2693 Female, age 94, both hemispheres 15.7
1990 Female, age 91, right hemisphere 15.4
Perirhinal gyrus
nTPM: 16.4
2848 Male, age 76, right hemisphere 17.5
1841 Female, age 85, right hemisphere 16.7
2521 Female, age 94, right hemisphere 16.4
1847 Female, age 91, left hemisphere 15.8
1794 Male, age 80, right hemisphere 15.7
Subiculum
nTPM: 15.6
2042 Male, age 76, both hemispheres 16.9
1977 Female, age 85, both hemispheres 16.7
2619 Male, age 74, both hemispheres 16.1
1901 Male, age 80, both hemispheres 15.9
2729 Female, age 91, right hemisphere 14.7
2438 Female, age 94, left hemisphere 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.1
Samples: 197

Max nTPM: 9.0
Min nTPM: 3.5
Std nTPM: 1.0
Median nTPM: 6.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 9.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 8.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 8.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 8.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 8.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 8.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 8.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 7.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 7.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 7.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10153-102I9 76 years, female 28.6
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.0
Pig sample Sample description nTPM
Subiculum
nTPM: 6.9
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.3
Sample A Female 8.2
Sample B Female 6.4
Sample C Male 6.7
Sample D Male 6.3
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 10.2
Min nTPM: 5.9
Sample A Female 10.2
Sample B Female 8.8
Sample C Male 6.9
Sample D Male 5.9
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 7.9
Sample C Male 8.4
Sample D Male 6.8
Ventral hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.4
Sample A Female 6.9
Sample B Female 6.4
Sample C Male 8.4
Sample D Male 9.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.2
Samples: 4

Max nTPM: 41.4
Min nTPM: 35.7
Sample A Male 41.4
Sample B Male 40.1
Sample C Female 39.7
Sample D Female 35.7
Hippocampal formation
nTPM: 35.9
Samples: 4

Max nTPM: 36.9
Min nTPM: 34.1
Sample A Male 36.9
Sample B Male 36.1
Sample C Female 36.5
Sample D Female 34.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68845454 Antisense, RP_050224_01_G10, Mouse strain C57BL/6J (56 days, male) 0.7

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