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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
557.9
nTPM
Monaco:
138.7
nTPM
Schmiedel:
182.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
557.9
HPA sample
nTPM
gdT-cell nTPM: 348.4
Samples: 6
Max nTPM: 481.2
Min nTPM: 189.6
P10809_1007
189.6
P10809_1022
355.2
P10809_1041
481.2
P10809_1060
334.8
P10809_1077
362.4
P10809_1098
367.3
MAIT T-cell nTPM: 356.7
Samples: 6
Max nTPM: 505.1
Min nTPM: 146.0
P10809_1006
146.0
P10809_1024
394.1
P10809_1043
505.1
P10809_1062
359.7
P10809_1083
308.9
P10809_1097
426.5
Memory CD4 T-cell nTPM: 374.2
Samples: 6
Max nTPM: 462.8
Min nTPM: 174.3
P10809_1014
174.3
P10809_1026
393.9
P10809_1045
462.8
P10809_1064
430.6
P10809_1086
390.1
P10809_1113
393.5
Memory CD8 T-cell nTPM: 384.0
Samples: 5
Max nTPM: 456.3
Min nTPM: 197.9
P10809_1012
197.9
P10809_1027
411.2
P10809_1046
416.6
P10809_1065
456.3
P10809_1111
438.2
Naive CD4 T-cell nTPM: 321.0
Samples: 6
Max nTPM: 598.1
Min nTPM: 108.3
P10809_1015
108.3
P10809_1030
277.6
P10809_1049
598.1
P10809_1068
293.8
P10809_1085
367.2
P10809_1112
280.9
Naive CD8 T-cell nTPM: 330.3
Samples: 6
Max nTPM: 438.0
Min nTPM: 119.7
P10809_1016
119.7
P10809_1031
314.3
P10809_1050
424.4
P10809_1069
438.0
P10809_1087
374.8
P10809_1110
310.4
T-reg nTPM: 557.9
Samples: 6
Max nTPM: 882.3
Min nTPM: 239.9
P10809_1018
239.9
P10809_1037
483.5
P10809_1056
882.3
P10809_1075
612.6
P10809_1094
526.4
P10809_1106
602.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
138.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.1
Samples: 4
Max nTPM: 107.2
Min nTPM: 35.4
RHH5202_R3573
76.6
RHH5230_R3602
35.4
RHH5259_R3631
65.1
RHH5288_R3660
107.2
Effector memory CD8 T-cell nTPM: 73.2
Samples: 4
Max nTPM: 82.8
Min nTPM: 58.4
RHH5203_R3574
79.3
RHH5231_R3603
82.8
RHH5260_R3632
72.2
RHH5289_R3661
58.4
MAIT T-cell nTPM: 77.5
Samples: 4
Max nTPM: 114.3
Min nTPM: 61.6
RHH5233_R3605
62.6
RHH5205_R3576
71.4
RHH5262_R3634
61.6
RHH5297_R3663
114.3
Memory CD4 T-cell TFH nTPM: 103.6
Samples: 4
Max nTPM: 168.3
Min nTPM: 68.6
RHH5300_R3666
99.5
RHH5236_R3608
168.3
RHH5265_R3637
68.6
RHH5208_R3579
78.0
Memory CD4 T-cell Th1 nTPM: 97.5
Samples: 4
Max nTPM: 163.5
Min nTPM: 65.4
RHH5210_R3581
81.5
RHH5302_R3668
163.5
RHH5238_R3610
79.7
RHH5267_R3639
65.4
Memory CD4 T-cell Th1/Th17 nTPM: 81.8
Samples: 4
Max nTPM: 142.2
Min nTPM: 46.8
RHH5303_R3669
142.2
RHH5211_R3582
72.2
RHH5239_R3611
46.8
RHH5268_R3640
66.1
Memory CD4 T-cell Th17 nTPM: 66.6
Samples: 4
Max nTPM: 97.4
Min nTPM: 46.9
RHH5304_R3670
66.1
RHH5212_R3583
97.4
RHH5240_R3612
46.9
RHH5269_R3641
56.0
Memory CD4 T-cell Th2 nTPM: 68.1
Samples: 4
Max nTPM: 79.6
Min nTPM: 60.5
RHH5305_R3671
79.6
RHH5213_R3584
60.5
RHH5241_R3613
63.6
RHH5270_R3642
68.8
Naive CD4 T-cell nTPM: 71.4
Samples: 4
Max nTPM: 102.7
Min nTPM: 48.0
RHH5306_R3672
84.1
RHH5214_R3585
102.7
RHH5242_R3614
48.0
RHH5271_R3643
50.8
Naive CD8 T-cell nTPM: 47.6
Samples: 4
Max nTPM: 56.2
Min nTPM: 34.5
RHH5201_R3572
46.0
RHH5229_R3601
34.5
RHH5258_R3630
53.7
RHH5287_R3659
56.2
Non-Vd2 gdTCR nTPM: 100.3
Samples: 4
Max nTPM: 143.8
Min nTPM: 67.5
RHH5235_R3607
67.5
RHH5264_R3636
103.6
RHH5207_R3578
86.3
RHH5299_R3665
143.8
T-reg nTPM: 106.0
Samples: 4
Max nTPM: 148.8
Min nTPM: 48.8
RHH5301_R3667
148.8
RHH5237_R3609
147.6
RHH5266_R3638
48.8
RHH5209_R3580
78.6
Terminal effector memory CD4 T-cell nTPM: 82.9
Samples: 2
Max nTPM: 88.1
Min nTPM: 77.6
RHH5243_R3615
77.6
RHH5272_R3644
88.1
Terminal effector memory CD8 T-cell nTPM: 138.7
Samples: 4
Max nTPM: 279.8
Min nTPM: 68.0
RHH5232_R3604
68.0
RHH5204_R3575
279.8
RHH5261_R3633
100.9
RHH5296_R3662
105.9
Vd2 gdTCR nTPM: 131.5
Samples: 4
Max nTPM: 230.0
Min nTPM: 52.9
RHH5234_R3606
52.9
RHH5206_R3577
230.0
RHH5263_R3635
80.8
RHH5298_R3664
162.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
