HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:31.8 nTPM
HPA Brain:23.8 nTPM
GTEx:31.8 nTPM
FANTOM5:84.1 Scaled Tags Per Million
Pig:98.8 nTPM
Mouse:16.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005741Antibody HPA011731Antibody CAB008366
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.8
Sample id Sample description nTPM
Hippocampus
nTPM: 23.8
2148 Female, age 91, left hemisphere 28.0
1898 Male, age 80, left hemisphere 27.5
1911 Female, age 85, right hemisphere 24.7
2529 Female, age 94, left hemisphere 24.1
1855 Male, age 76, left hemisphere 19.4
2621 Female, age 67, right hemisphere 19.0
Dentate gyrus
nTPM: 18.0
2528 Male, age 74, both hemispheres 22.5
2246 Female, age 85, both hemispheres 20.9
2010 Male, age 76, both hemispheres 18.2
2530 Female, age 94, left hemisphere 18.0
1927 Female, age 91, both hemispheres 17.2
2531 Female, age 67, both hemispheres 11.4
Entorhinal gyrus
nTPM: 19.3
2117 Female, age 91, right hemisphere 32.8
1938 Female, age 85, left hemisphere 22.9
1787 Male, age 76, left hemisphere 19.1
2764 Male, age 80, right hemisphere 16.4
2686 Male, age 75, right hemisphere 14.5
2613 Female, age 94, left hemisphere 10.5
Hippocampus, CA1
nTPM: 19.4
2527 Male, age 74, both hemispheres 24.4
1873 Female, age 85, both hemispheres 23.2
2082 Female, age 91, right hemisphere 22.3
2749 Male, age 80, left hemisphere 16.3
2045 Male, age 76, both hemispheres 10.7
Hippocampus, CA2
nTPM: 20.7
2249 Male, age 74, both hemispheres 27.0
1940 Female, age 85, left hemisphere 26.1
2113 Female, age 91, right hemisphere 24.9
1963 Male, age 80, left hemisphere 19.6
2437 Female, age 94, left hemisphere 17.0
1892 Male, age 76, both hemispheres 9.6
Hippocampus, CA3
nTPM: 17.6
2436 Male, age 74, both hemispheres 24.6
1891 Female, age 85, both hemispheres 21.7
2620 Female, age 94, left hemisphere 16.8
1867 Male, age 76, both hemispheres 15.9
2137 Male, age 80, left hemisphere 14.2
2861 Female, age 67, both hemispheres 12.5
Parahippocampal cortex
nTPM: 19.1
1933 Female, age 85, both hemispheres 22.2
2622 Female, age 67, right hemisphere 22.1
2250 Female, age 67, right hemisphere 22.0
1990 Female, age 91, right hemisphere 21.0
2692 Male, age 74, both hemispheres 19.1
2018 Male, age 76, both hemispheres 18.8
1850 Male, age 80, both hemispheres 17.6
2245 Female, age 91, both hemispheres 17.4
2693 Female, age 94, both hemispheres 16.0
2532 Female, age 72, left hemisphere 14.5
Perirhinal gyrus
nTPM: 17.4
1794 Male, age 80, right hemisphere 22.2
1847 Female, age 91, left hemisphere 21.1
1841 Female, age 85, right hemisphere 18.7
2521 Female, age 94, right hemisphere 14.3
2848 Male, age 76, right hemisphere 10.9
Subiculum
nTPM: 20.1
2729 Female, age 91, right hemisphere 31.8
2619 Male, age 74, both hemispheres 25.2
2042 Male, age 76, both hemispheres 20.0
1977 Female, age 85, both hemispheres 17.0
1901 Male, age 80, both hemispheres 15.3
2438 Female, age 94, left hemisphere 11.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.8
Samples: 197

Max nTPM: 76.8
Min nTPM: 6.7
Std nTPM: 12.7
Median nTPM: 30.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 72.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 64.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 62.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 62.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 61.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 60.2
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 59.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 57.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 55.4
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 55.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.1
FF:10153-102I9 76 years, female 106.9
FF:10169-103B7 60 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.8
Pig sample Sample description nTPM
Subiculum
nTPM: 85.9
Samples: 4

Max nTPM: 114.0
Min nTPM: 70.5
Sample A Female 114.0
Sample B Female 82.5
Sample C Male 76.5
Sample D Male 70.5
Dorsal hippocampus
nTPM: 98.8
Samples: 4

Max nTPM: 139.2
Min nTPM: 58.5
Sample A Female 139.2
Sample B Female 67.9
Sample C Male 129.5
Sample D Male 58.5
Entorhinal cortex
nTPM: 69.4
Samples: 4

Max nTPM: 76.2
Min nTPM: 56.2
Sample A Female 76.2
Sample B Female 72.1
Sample C Male 73.0
Sample D Male 56.2
Ventral hippocampus
nTPM: 89.2
Samples: 4

Max nTPM: 113.8
Min nTPM: 67.8
Sample A Female 93.1
Sample B Female 67.8
Sample C Male 113.8
Sample D Male 82.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.9
Sample A Male 15.7
Sample B Male 14.9
Sample C Female 16.6
Sample D Female 19.4
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.5
Sample A Male 15.6
Sample B Male 12.5
Sample C Female 13.9
Sample D Female 15.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69261401 Antisense, RP_050113_02_H11, Mouse strain C57BL/6J (56 days, male) 0.9
71764287 Antisense, RP_050921_03_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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