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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
378.6
nTPM
Monaco:
209.4
nTPM
Schmiedel:
142.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
378.6
HPA sample
nTPM
gdT-cell nTPM: 346.5
Samples: 6
Max nTPM: 425.2
Min nTPM: 173.5
P10809_1007
326.6
P10809_1022
390.7
P10809_1041
425.2
P10809_1060
173.5
P10809_1077
379.5
P10809_1098
383.2
MAIT T-cell nTPM: 315.0
Samples: 6
Max nTPM: 495.6
Min nTPM: 200.2
P10809_1006
244.0
P10809_1024
200.2
P10809_1043
431.7
P10809_1062
220.9
P10809_1083
297.5
P10809_1097
495.6
Memory CD4 T-cell nTPM: 282.4
Samples: 6
Max nTPM: 375.2
Min nTPM: 143.8
P10809_1014
231.1
P10809_1026
360.3
P10809_1045
375.2
P10809_1064
359.4
P10809_1086
224.5
P10809_1113
143.8
Memory CD8 T-cell nTPM: 378.6
Samples: 5
Max nTPM: 565.5
Min nTPM: 277.5
P10809_1012
312.0
P10809_1027
277.5
P10809_1046
565.5
P10809_1065
349.3
P10809_1111
388.9
Naive CD4 T-cell nTPM: 196.4
Samples: 6
Max nTPM: 352.0
Min nTPM: 117.9
P10809_1015
117.9
P10809_1030
183.2
P10809_1049
352.0
P10809_1068
142.1
P10809_1085
244.0
P10809_1112
139.4
Naive CD8 T-cell nTPM: 256.0
Samples: 6
Max nTPM: 353.5
Min nTPM: 174.2
P10809_1016
174.2
P10809_1031
260.1
P10809_1050
319.2
P10809_1069
353.5
P10809_1087
195.7
P10809_1110
233.5
T-reg nTPM: 335.4
Samples: 6
Max nTPM: 749.4
Min nTPM: 192.8
P10809_1018
192.8
P10809_1037
297.3
P10809_1056
749.4
P10809_1075
256.5
P10809_1094
220.3
P10809_1106
296.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
209.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.8
Samples: 4
Max nTPM: 150.2
Min nTPM: 86.5
RHH5202_R3573
86.5
RHH5230_R3602
150.2
RHH5259_R3631
96.1
RHH5288_R3660
122.4
Effector memory CD8 T-cell nTPM: 120.0
Samples: 4
Max nTPM: 188.1
Min nTPM: 28.8
RHH5203_R3574
119.9
RHH5231_R3603
188.1
RHH5260_R3632
143.3
RHH5289_R3661
28.8
MAIT T-cell nTPM: 156.8
Samples: 4
Max nTPM: 213.9
Min nTPM: 106.7
RHH5233_R3605
107.4
RHH5205_R3576
106.7
RHH5262_R3634
213.9
RHH5297_R3663
199.0
Memory CD4 T-cell TFH nTPM: 127.6
Samples: 4
Max nTPM: 228.8
Min nTPM: 46.1
RHH5300_R3666
163.6
RHH5236_R3608
228.8
RHH5265_R3637
71.7
RHH5208_R3579
46.1
Memory CD4 T-cell Th1 nTPM: 116.8
Samples: 4
Max nTPM: 159.7
Min nTPM: 88.8
RHH5210_R3581
88.8
RHH5302_R3668
159.7
RHH5238_R3610
95.4
RHH5267_R3639
123.4
Memory CD4 T-cell Th1/Th17 nTPM: 102.6
Samples: 4
Max nTPM: 166.2
Min nTPM: 63.3
RHH5303_R3669
86.7
RHH5211_R3582
166.2
RHH5239_R3611
63.3
RHH5268_R3640
94.3
Memory CD4 T-cell Th17 nTPM: 74.1
Samples: 4
Max nTPM: 144.7
Min nTPM: 35.9
RHH5304_R3670
54.0
RHH5212_R3583
144.7
RHH5240_R3612
35.9
RHH5269_R3641
61.7
Memory CD4 T-cell Th2 nTPM: 88.4
Samples: 4
Max nTPM: 119.5
Min nTPM: 70.6
RHH5305_R3671
75.5
RHH5213_R3584
119.5
RHH5241_R3613
70.6
RHH5270_R3642
87.8
Naive CD4 T-cell nTPM: 83.0
Samples: 4
Max nTPM: 137.2
Min nTPM: 44.3
RHH5306_R3672
102.0
RHH5214_R3585
137.2
RHH5242_R3614
48.6
RHH5271_R3643
44.3
Naive CD8 T-cell nTPM: 73.6
Samples: 4
Max nTPM: 117.9
Min nTPM: 39.7
RHH5201_R3572
39.7
RHH5229_R3601
62.4
RHH5258_R3630
117.9
RHH5287_R3659
74.4
Non-Vd2 gdTCR nTPM: 183.8
Samples: 4
Max nTPM: 335.4
Min nTPM: 119.2
RHH5235_R3607
133.6
RHH5264_R3636
146.9
RHH5207_R3578
119.2
RHH5299_R3665
335.4
T-reg nTPM: 125.1
Samples: 4
Max nTPM: 181.7
Min nTPM: 69.8
RHH5301_R3667
155.7
RHH5237_R3609
181.7
RHH5266_R3638
69.8
RHH5209_R3580
93.0
Terminal effector memory CD4 T-cell nTPM: 124.0
Samples: 2
Max nTPM: 135.6
Min nTPM: 112.4
RHH5243_R3615
112.4
RHH5272_R3644
135.6
Terminal effector memory CD8 T-cell nTPM: 204.6
Samples: 4
Max nTPM: 383.5
Min nTPM: 127.0
RHH5232_R3604
137.2
RHH5204_R3575
383.5
RHH5261_R3633
170.8
RHH5296_R3662
127.0
Vd2 gdTCR nTPM: 209.4
Samples: 4
Max nTPM: 309.3
Min nTPM: 107.0
RHH5234_R3606
133.5
RHH5206_R3577
309.3
RHH5263_R3635
107.0
RHH5298_R3664
287.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.