HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:211.3 nTPM
HPA Brain:297.9 nTPM
GTEx:211.3 nTPM
FANTOM5:268.7 Scaled Tags Per Million
Pig:111.3 nTPM
Mouse:185.2 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 297.9
Sample id Sample description nTPM
Hippocampus
nTPM: 297.9
2529 Female, age 94, left hemisphere 341.4
1898 Male, age 80, left hemisphere 302.0
2148 Female, age 91, left hemisphere 298.2
1911 Female, age 85, right hemisphere 295.4
1855 Male, age 76, left hemisphere 291.1
2621 Female, age 67, right hemisphere 259.2
Dentate gyrus
nTPM: 277.4
2528 Male, age 74, both hemispheres 320.7
2010 Male, age 76, both hemispheres 313.3
2530 Female, age 94, left hemisphere 300.6
2246 Female, age 85, both hemispheres 247.1
2531 Female, age 67, both hemispheres 246.7
1927 Female, age 91, both hemispheres 236.3
Entorhinal gyrus
nTPM: 264.2
2117 Female, age 91, right hemisphere 345.9
1787 Male, age 76, left hemisphere 284.1
2764 Male, age 80, right hemisphere 277.0
1938 Female, age 85, left hemisphere 247.5
2686 Male, age 75, right hemisphere 226.7
2613 Female, age 94, left hemisphere 204.2
Hippocampus, CA1
nTPM: 283.4
2749 Male, age 80, left hemisphere 389.3
1873 Female, age 85, both hemispheres 279.3
2527 Male, age 74, both hemispheres 265.5
2082 Female, age 91, right hemisphere 255.8
2045 Male, age 76, both hemispheres 227.3
Hippocampus, CA2
nTPM: 282.8
2249 Male, age 74, both hemispheres 340.0
1963 Male, age 80, left hemisphere 323.7
1940 Female, age 85, left hemisphere 278.6
2113 Female, age 91, right hemisphere 278.4
2437 Female, age 94, left hemisphere 274.4
1892 Male, age 76, both hemispheres 201.7
Hippocampus, CA3
nTPM: 263.3
2137 Male, age 80, left hemisphere 322.9
2620 Female, age 94, left hemisphere 276.7
2861 Female, age 67, both hemispheres 259.5
1867 Male, age 76, both hemispheres 251.0
1891 Female, age 85, both hemispheres 248.3
2436 Male, age 74, both hemispheres 221.4
Parahippocampal cortex
nTPM: 228.9
1990 Female, age 91, right hemisphere 258.5
2245 Female, age 91, both hemispheres 250.1
1933 Female, age 85, both hemispheres 248.9
2018 Male, age 76, both hemispheres 246.0
2692 Male, age 74, both hemispheres 241.9
2532 Female, age 72, left hemisphere 239.2
2250 Female, age 67, right hemisphere 219.7
1850 Male, age 80, both hemispheres 210.2
2693 Female, age 94, both hemispheres 194.4
2622 Female, age 67, right hemisphere 180.0
Perirhinal gyrus
nTPM: 225.6
1794 Male, age 80, right hemisphere 259.3
2521 Female, age 94, right hemisphere 245.5
1841 Female, age 85, right hemisphere 224.4
2848 Male, age 76, right hemisphere 207.1
1847 Female, age 91, left hemisphere 191.9
Subiculum
nTPM: 296.9
2042 Male, age 76, both hemispheres 345.8
1901 Male, age 80, both hemispheres 306.1
2729 Female, age 91, right hemisphere 300.6
1977 Female, age 85, both hemispheres 286.4
2438 Female, age 94, left hemisphere 279.2
2619 Male, age 74, both hemispheres 263.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 211.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 211.3
Samples: 197

Max nTPM: 416.8
Min nTPM: 100.7
Std nTPM: 67.3
Median nTPM: 199.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 416.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 415.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 396.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 395.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 394.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 386.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 382.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 356.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 355.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 352.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 347.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 268.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 268.7
FF:10153-102I9 76 years, female 290.3
FF:10169-103B7 60 years, female 247.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 111.3
Pig sample Sample description nTPM
Subiculum
nTPM: 89.1
Samples: 4

Max nTPM: 107.0
Min nTPM: 73.0
Sample A Female 107.0
Sample B Female 73.0
Sample C Male 90.9
Sample D Male 85.3
Dorsal hippocampus
nTPM: 111.3
Samples: 4

Max nTPM: 143.4
Min nTPM: 77.1
Sample A Female 143.4
Sample B Female 102.8
Sample C Male 122.0
Sample D Male 77.1
Entorhinal cortex
nTPM: 85.7
Samples: 4

Max nTPM: 95.7
Min nTPM: 66.2
Sample A Female 95.7
Sample B Female 88.4
Sample C Male 92.4
Sample D Male 66.2
Ventral hippocampus
nTPM: 104.4
Samples: 4

Max nTPM: 135.5
Min nTPM: 68.2
Sample A Female 99.6
Sample B Female 68.2
Sample C Male 135.5
Sample D Male 114.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 185.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 128.8
Samples: 4

Max nTPM: 142.8
Min nTPM: 120.7
Sample A Male 129.9
Sample B Male 120.7
Sample C Female 142.8
Sample D Female 121.7
Hippocampal formation
nTPM: 185.2
Samples: 4

Max nTPM: 223.0
Min nTPM: 162.2
Sample A Male 162.2
Sample B Male 179.1
Sample C Female 223.0
Sample D Female 176.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
70429393 Antisense, RP_050614_01_E12, Mouse strain C57BL/6J (56 days, male) 16.4

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