HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:52.1 nTPM
HPA Brain:173.5 nTPM
GTEx:52.1 nTPM
FANTOM5:69.2 Scaled Tags Per Million
Pig:65.2 nTPM
Mouse:61.6 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038143Antibody HPA038144
Glial cells Not detectedLow
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 173.5
Sample id Sample description nTPM
Hippocampus
nTPM: 151.8
1898 Male, age 80, left hemisphere 185.9
2529 Female, age 94, left hemisphere 181.9
2148 Female, age 91, left hemisphere 153.2
2621 Female, age 67, right hemisphere 146.1
1855 Male, age 76, left hemisphere 138.2
1911 Female, age 85, right hemisphere 105.7
Dentate gyrus
nTPM: 146.9
2531 Female, age 67, both hemispheres 164.8
2530 Female, age 94, left hemisphere 164.5
2528 Male, age 74, both hemispheres 151.7
2010 Male, age 76, both hemispheres 136.9
1927 Female, age 91, both hemispheres 136.3
2246 Female, age 85, both hemispheres 127.3
Entorhinal gyrus
nTPM: 173.5
2613 Female, age 94, left hemisphere 221.0
2764 Male, age 80, right hemisphere 201.3
2686 Male, age 75, right hemisphere 166.6
1787 Male, age 76, left hemisphere 160.6
1938 Female, age 85, left hemisphere 150.3
2117 Female, age 91, right hemisphere 141.2
Hippocampus, CA1
nTPM: 124.8
2527 Male, age 74, both hemispheres 141.4
2082 Female, age 91, right hemisphere 141.3
1873 Female, age 85, both hemispheres 121.0
2749 Male, age 80, left hemisphere 118.1
2045 Male, age 76, both hemispheres 102.4
Hippocampus, CA2
nTPM: 162.8
2437 Female, age 94, left hemisphere 239.7
1892 Male, age 76, both hemispheres 179.0
1963 Male, age 80, left hemisphere 178.5
2113 Female, age 91, right hemisphere 137.4
1940 Female, age 85, left hemisphere 129.7
2249 Male, age 74, both hemispheres 112.5
Hippocampus, CA3
nTPM: 140.0
2861 Female, age 67, both hemispheres 199.9
2620 Female, age 94, left hemisphere 155.0
1867 Male, age 76, both hemispheres 136.5
2137 Male, age 80, left hemisphere 122.0
1891 Female, age 85, both hemispheres 116.4
2436 Male, age 74, both hemispheres 110.5
Parahippocampal cortex
nTPM: 163.9
2622 Female, age 67, right hemisphere 214.7
2532 Female, age 72, left hemisphere 177.7
2245 Female, age 91, both hemispheres 170.0
1990 Female, age 91, right hemisphere 168.4
1850 Male, age 80, both hemispheres 160.6
2692 Male, age 74, both hemispheres 154.3
1933 Female, age 85, both hemispheres 151.7
2693 Female, age 94, both hemispheres 150.1
2018 Male, age 76, both hemispheres 148.7
2250 Female, age 67, right hemisphere 142.3
Perirhinal gyrus
nTPM: 157.7
1847 Female, age 91, left hemisphere 178.3
1794 Male, age 80, right hemisphere 174.4
2521 Female, age 94, right hemisphere 150.0
2848 Male, age 76, right hemisphere 143.3
1841 Female, age 85, right hemisphere 142.3
Subiculum
nTPM: 149.6
2438 Female, age 94, left hemisphere 220.0
2619 Male, age 74, both hemispheres 172.1
1977 Female, age 85, both hemispheres 149.8
1901 Male, age 80, both hemispheres 139.0
2729 Female, age 91, right hemisphere 126.3
2042 Male, age 76, both hemispheres 90.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.1
Samples: 197

Max nTPM: 188.7
Min nTPM: 11.8
Std nTPM: 26.3
Median nTPM: 44.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 188.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 152.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 135.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 132.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 120.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 119.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 118.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 108.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 105.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 104.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 102.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.2
FF:10153-102I9 76 years, female 91.8
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.2
Pig sample Sample description nTPM
Subiculum
nTPM: 52.6
Samples: 4

Max nTPM: 70.1
Min nTPM: 40.7
Sample A Female 70.1
Sample B Female 44.3
Sample C Male 55.3
Sample D Male 40.7
Dorsal hippocampus
nTPM: 57.1
Samples: 4

Max nTPM: 65.7
Min nTPM: 41.6
Sample A Female 65.7
Sample B Female 62.2
Sample C Male 58.7
Sample D Male 41.6
Entorhinal cortex
nTPM: 65.2
Samples: 4

Max nTPM: 68.4
Min nTPM: 60.1
Sample A Female 68.4
Sample B Female 60.1
Sample C Male 65.8
Sample D Male 66.6
Ventral hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 73.9
Min nTPM: 42.4
Sample A Female 58.6
Sample B Female 42.4
Sample C Male 73.9
Sample D Male 63.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.6
Samples: 4

Max nTPM: 68.2
Min nTPM: 52.5
Sample A Male 64.1
Sample B Male 61.7
Sample C Female 52.5
Sample D Female 68.2
Hippocampal formation
nTPM: 55.8
Samples: 4

Max nTPM: 62.3
Min nTPM: 48.3
Sample A Male 48.3
Sample B Male 56.0
Sample C Female 62.3
Sample D Female 56.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70946251 Antisense, RP_050426_04_G06, Mouse strain C57BL/6J (56 days, male) 8.3
77332673 Antisense, RP_070116_02_B04, Mouse strain C57BL/6J (56 days, male) 5.0

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