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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
395.2
nTPM
Monaco:
400.7
nTPM
Schmiedel:
108.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
395.2
HPA sample
nTPM
gdT-cell nTPM: 395.2
Samples: 6
Max nTPM: 453.8
Min nTPM: 349.6
P10809_1007
453.8
P10809_1022
400.5
P10809_1041
411.0
P10809_1060
349.6
P10809_1077
367.3
P10809_1098
389.0
MAIT T-cell nTPM: 301.5
Samples: 6
Max nTPM: 367.3
Min nTPM: 249.4
P10809_1006
295.8
P10809_1024
367.3
P10809_1043
300.2
P10809_1062
304.1
P10809_1083
249.4
P10809_1097
292.3
Memory CD4 T-cell nTPM: 186.7
Samples: 6
Max nTPM: 222.6
Min nTPM: 154.1
P10809_1014
188.4
P10809_1026
154.1
P10809_1045
188.9
P10809_1064
222.6
P10809_1086
206.6
P10809_1113
159.7
Memory CD8 T-cell nTPM: 230.4
Samples: 5
Max nTPM: 278.8
Min nTPM: 179.8
P10809_1012
189.4
P10809_1027
259.4
P10809_1046
244.5
P10809_1065
278.8
P10809_1111
179.8
Naive CD4 T-cell nTPM: 227.8
Samples: 6
Max nTPM: 278.2
Min nTPM: 181.5
P10809_1015
278.2
P10809_1030
197.0
P10809_1049
211.1
P10809_1068
249.2
P10809_1085
249.9
P10809_1112
181.5
Naive CD8 T-cell nTPM: 265.7
Samples: 6
Max nTPM: 301.2
Min nTPM: 217.3
P10809_1016
301.2
P10809_1031
291.3
P10809_1050
300.9
P10809_1069
257.2
P10809_1087
226.1
P10809_1110
217.3
T-reg nTPM: 13.9
Samples: 6
Max nTPM: 19.7
Min nTPM: 8.2
P10809_1018
16.2
P10809_1037
19.7
P10809_1056
19.4
P10809_1075
8.2
P10809_1094
11.0
P10809_1106
8.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
400.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 157.7
Samples: 4
Max nTPM: 212.7
Min nTPM: 123.8
RHH5202_R3573
212.7
RHH5230_R3602
123.8
RHH5259_R3631
135.2
RHH5288_R3660
159.0
Effector memory CD8 T-cell nTPM: 118.0
Samples: 4
Max nTPM: 146.9
Min nTPM: 91.9
RHH5203_R3574
139.5
RHH5231_R3603
93.8
RHH5260_R3632
91.9
RHH5289_R3661
146.9
MAIT T-cell nTPM: 229.7
Samples: 4
Max nTPM: 317.8
Min nTPM: 169.4
RHH5233_R3605
174.0
RHH5205_R3576
257.4
RHH5262_R3634
169.4
RHH5297_R3663
317.8
Memory CD4 T-cell TFH nTPM: 212.5
Samples: 4
Max nTPM: 282.5
Min nTPM: 156.5
RHH5300_R3666
225.2
RHH5236_R3608
156.5
RHH5265_R3637
185.9
RHH5208_R3579
282.5
Memory CD4 T-cell Th1 nTPM: 192.7
Samples: 4
Max nTPM: 240.5
Min nTPM: 141.1
RHH5210_R3581
240.5
RHH5302_R3668
216.3
RHH5238_R3610
141.1
RHH5267_R3639
173.0
Memory CD4 T-cell Th1/Th17 nTPM: 136.2
Samples: 4
Max nTPM: 143.2
Min nTPM: 123.7
RHH5303_R3669
123.7
RHH5211_R3582
143.2
RHH5239_R3611
137.3
RHH5268_R3640
140.6
Memory CD4 T-cell Th17 nTPM: 111.3
Samples: 4
Max nTPM: 163.9
Min nTPM: 56.6
RHH5304_R3670
163.9
RHH5212_R3583
119.3
RHH5240_R3612
56.6
RHH5269_R3641
105.5
Memory CD4 T-cell Th2 nTPM: 109.4
Samples: 4
Max nTPM: 122.9
Min nTPM: 97.7
RHH5305_R3671
112.2
RHH5213_R3584
122.9
RHH5241_R3613
97.7
RHH5270_R3642
104.9
Naive CD4 T-cell nTPM: 262.7
Samples: 4
Max nTPM: 275.1
Min nTPM: 253.4
RHH5306_R3672
258.7
RHH5214_R3585
275.1
RHH5242_R3614
253.4
RHH5271_R3643
263.7
Naive CD8 T-cell nTPM: 230.7
Samples: 4
Max nTPM: 296.5
Min nTPM: 125.1
RHH5201_R3572
296.5
RHH5229_R3601
125.1
RHH5258_R3630
225.1
RHH5287_R3659
276.1
Non-Vd2 gdTCR nTPM: 400.7
Samples: 4
Max nTPM: 581.8
Min nTPM: 264.6
RHH5235_R3607
320.3
RHH5264_R3636
264.6
RHH5207_R3578
581.8
RHH5299_R3665
436.2
T-reg nTPM: 120.8
Samples: 4
Max nTPM: 147.3
Min nTPM: 59.2
RHH5301_R3667
138.5
RHH5237_R3609
59.2
RHH5266_R3638
138.3
RHH5209_R3580
147.3
Terminal effector memory CD4 T-cell nTPM: 333.3
Samples: 2
Max nTPM: 349.8
Min nTPM: 316.7
RHH5243_R3615
316.7
RHH5272_R3644
349.8
Terminal effector memory CD8 T-cell nTPM: 392.3
Samples: 4
Max nTPM: 765.3
Min nTPM: 211.1
RHH5232_R3604
273.9
RHH5204_R3575
765.3
RHH5261_R3633
211.1
RHH5296_R3662
318.8
Vd2 gdTCR nTPM: 287.4
Samples: 4
Max nTPM: 497.8
Min nTPM: 164.4
RHH5234_R3606
198.4
RHH5206_R3577
497.8
RHH5263_R3635
164.4
RHH5298_R3664
288.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
