HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:110.7 nTPM
HPA Brain:121.4 nTPM
GTEx:110.7 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:98.9 nTPM
Mouse:110.7 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021438Antibody HPA024734
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.4
Sample id Sample description nTPM
Hippocampus
nTPM: 92.0
2621 Female, age 67, right hemisphere 102.9
1898 Male, age 80, left hemisphere 99.8
2529 Female, age 94, left hemisphere 96.1
2148 Female, age 91, left hemisphere 94.2
1911 Female, age 85, right hemisphere 81.6
1855 Male, age 76, left hemisphere 77.3
Dentate gyrus
nTPM: 94.8
2531 Female, age 67, both hemispheres 125.1
2530 Female, age 94, left hemisphere 107.5
1927 Female, age 91, both hemispheres 90.4
2246 Female, age 85, both hemispheres 87.0
2528 Male, age 74, both hemispheres 80.7
2010 Male, age 76, both hemispheres 77.8
Entorhinal gyrus
nTPM: 103.3
2613 Female, age 94, left hemisphere 132.2
2764 Male, age 80, right hemisphere 121.8
1787 Male, age 76, left hemisphere 99.2
2686 Male, age 75, right hemisphere 97.3
1938 Female, age 85, left hemisphere 94.2
2117 Female, age 91, right hemisphere 75.2
Hippocampus, CA1
nTPM: 88.6
2045 Male, age 76, both hemispheres 102.4
2749 Male, age 80, left hemisphere 100.3
1873 Female, age 85, both hemispheres 89.7
2082 Female, age 91, right hemisphere 82.9
2527 Male, age 74, both hemispheres 67.9
Hippocampus, CA2
nTPM: 87.2
2437 Female, age 94, left hemisphere 102.6
1940 Female, age 85, left hemisphere 101.6
1963 Male, age 80, left hemisphere 86.4
2113 Female, age 91, right hemisphere 84.3
1892 Male, age 76, both hemispheres 82.4
2249 Male, age 74, both hemispheres 65.9
Hippocampus, CA3
nTPM: 104.5
2620 Female, age 94, left hemisphere 166.9
2861 Female, age 67, both hemispheres 126.2
2137 Male, age 80, left hemisphere 96.4
1891 Female, age 85, both hemispheres 80.4
1867 Male, age 76, both hemispheres 79.0
2436 Male, age 74, both hemispheres 78.1
Parahippocampal cortex
nTPM: 99.4
1850 Male, age 80, both hemispheres 117.8
2622 Female, age 67, right hemisphere 112.9
2245 Female, age 91, both hemispheres 111.8
2532 Female, age 72, left hemisphere 103.4
2693 Female, age 94, both hemispheres 102.8
1933 Female, age 85, both hemispheres 100.8
2250 Female, age 67, right hemisphere 90.6
1990 Female, age 91, right hemisphere 89.9
2018 Male, age 76, both hemispheres 84.3
2692 Male, age 74, both hemispheres 79.3
Perirhinal gyrus
nTPM: 121.4
1794 Male, age 80, right hemisphere 142.5
2521 Female, age 94, right hemisphere 133.1
1841 Female, age 85, right hemisphere 116.5
1847 Female, age 91, left hemisphere 112.7
2848 Male, age 76, right hemisphere 102.3
Subiculum
nTPM: 81.2
1977 Female, age 85, both hemispheres 89.6
1901 Male, age 80, both hemispheres 87.1
2619 Male, age 74, both hemispheres 83.6
2729 Female, age 91, right hemisphere 76.5
2438 Female, age 94, left hemisphere 76.0
2042 Male, age 76, both hemispheres 74.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.7
Samples: 197

Max nTPM: 212.6
Min nTPM: 26.4
Std nTPM: 30.8
Median nTPM: 110.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 212.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 197.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 193.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 188.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 187.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 183.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 177.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 175.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 175.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 167.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 164.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.9
FF:10153-102I9 76 years, female 51.4
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.9
Pig sample Sample description nTPM
Subiculum
nTPM: 65.1
Samples: 4

Max nTPM: 83.8
Min nTPM: 55.8
Sample A Female 83.8
Sample B Female 62.0
Sample C Male 58.7
Sample D Male 55.8
Dorsal hippocampus
nTPM: 98.9
Samples: 4

Max nTPM: 120.2
Min nTPM: 68.2
Sample A Female 120.2
Sample B Female 114.7
Sample C Male 68.2
Sample D Male 92.5
Entorhinal cortex
nTPM: 86.4
Samples: 4

Max nTPM: 96.9
Min nTPM: 74.0
Sample A Female 92.3
Sample B Female 82.5
Sample C Male 96.9
Sample D Male 74.0
Ventral hippocampus
nTPM: 83.4
Samples: 4

Max nTPM: 119.9
Min nTPM: 65.4
Sample A Female 65.4
Sample B Female 67.4
Sample C Male 80.8
Sample D Male 119.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.4
Samples: 4

Max nTPM: 124.9
Min nTPM: 101.3
Sample A Male 110.5
Sample B Male 124.9
Sample C Female 104.7
Sample D Female 101.3
Hippocampal formation
nTPM: 110.7
Samples: 4

Max nTPM: 115.4
Min nTPM: 103.8
Sample A Male 113.9
Sample B Male 109.8
Sample C Female 103.8
Sample D Female 115.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69549263 Antisense, RP_050126_01_E06, Mouse strain C57BL/6J (56 days, male) 6.6

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