HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:56.8 nTPM
HPA Brain:86.3 nTPM
GTEx:56.8 nTPM
FANTOM5:76.3 Scaled Tags Per Million
Pig:33.8 nTPM
Mouse:45.1 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059297Antibody HPA069003Antibody CAB003434
Glial cells Not detectedLowLow
Neuronal cells Not detectedNot detectedMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 86.3
Sample id Sample description nTPM
Hippocampus
nTPM: 85.5
2529 Female, age 94, left hemisphere 91.9
1855 Male, age 76, left hemisphere 87.6
1911 Female, age 85, right hemisphere 87.2
2621 Female, age 67, right hemisphere 85.0
2148 Female, age 91, left hemisphere 83.1
1898 Male, age 80, left hemisphere 78.1
Dentate gyrus
nTPM: 86.0
2010 Male, age 76, both hemispheres 97.4
2530 Female, age 94, left hemisphere 97.4
1927 Female, age 91, both hemispheres 82.7
2531 Female, age 67, both hemispheres 81.7
2246 Female, age 85, both hemispheres 79.0
2528 Male, age 74, both hemispheres 77.8
Entorhinal gyrus
nTPM: 73.5
2686 Male, age 75, right hemisphere 90.1
2117 Female, age 91, right hemisphere 87.7
1787 Male, age 76, left hemisphere 69.4
2613 Female, age 94, left hemisphere 66.3
1938 Female, age 85, left hemisphere 66.0
2764 Male, age 80, right hemisphere 61.4
Hippocampus, CA1
nTPM: 81.1
2045 Male, age 76, both hemispheres 102.3
2527 Male, age 74, both hemispheres 83.6
1873 Female, age 85, both hemispheres 79.4
2749 Male, age 80, left hemisphere 73.6
2082 Female, age 91, right hemisphere 66.5
Hippocampus, CA2
nTPM: 80.8
1963 Male, age 80, left hemisphere 89.4
2437 Female, age 94, left hemisphere 85.1
1892 Male, age 76, both hemispheres 82.7
2249 Male, age 74, both hemispheres 78.8
1940 Female, age 85, left hemisphere 75.0
2113 Female, age 91, right hemisphere 73.6
Hippocampus, CA3
nTPM: 85.9
1867 Male, age 76, both hemispheres 102.8
2620 Female, age 94, left hemisphere 92.9
2137 Male, age 80, left hemisphere 84.1
1891 Female, age 85, both hemispheres 82.1
2861 Female, age 67, both hemispheres 80.7
2436 Male, age 74, both hemispheres 72.8
Parahippocampal cortex
nTPM: 76.6
2018 Male, age 76, both hemispheres 93.0
2692 Male, age 74, both hemispheres 83.2
2532 Female, age 72, left hemisphere 81.4
1933 Female, age 85, both hemispheres 76.1
2245 Female, age 91, both hemispheres 75.8
1990 Female, age 91, right hemisphere 74.9
1850 Male, age 80, both hemispheres 73.4
2693 Female, age 94, both hemispheres 72.5
2622 Female, age 67, right hemisphere 68.8
2250 Female, age 67, right hemisphere 66.8
Perirhinal gyrus
nTPM: 65.4
2848 Male, age 76, right hemisphere 70.3
1841 Female, age 85, right hemisphere 69.2
2521 Female, age 94, right hemisphere 66.9
1794 Male, age 80, right hemisphere 61.4
1847 Female, age 91, left hemisphere 59.2
Subiculum
nTPM: 86.3
2042 Male, age 76, both hemispheres 108.5
2438 Female, age 94, left hemisphere 88.8
1901 Male, age 80, both hemispheres 86.8
2729 Female, age 91, right hemisphere 81.3
2619 Male, age 74, both hemispheres 77.3
1977 Female, age 85, both hemispheres 74.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.8
Samples: 197

Max nTPM: 124.0
Min nTPM: 23.0
Std nTPM: 21.9
Median nTPM: 52.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 124.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 118.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 115.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 115.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 115.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 110.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 108.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 105.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 105.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 104.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 103.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.3
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 74.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.8
Pig sample Sample description nTPM
Subiculum
nTPM: 33.8
Samples: 4

Max nTPM: 42.1
Min nTPM: 26.1
Sample A Female 42.1
Sample B Female 26.1
Sample C Male 30.0
Sample D Male 37.0
Dorsal hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 38.3
Min nTPM: 24.9
Sample A Female 38.3
Sample B Female 24.9
Sample C Male 29.1
Sample D Male 28.3
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 41.8
Min nTPM: 29.6
Sample A Female 41.8
Sample B Female 32.3
Sample C Male 30.5
Sample D Male 29.6
Ventral hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 24.6
Sample A Female 32.0
Sample B Female 24.6
Sample C Male 31.7
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.1
Samples: 4

Max nTPM: 47.7
Min nTPM: 42.8
Sample A Male 46.3
Sample B Male 42.8
Sample C Female 43.7
Sample D Female 47.7
Hippocampal formation
nTPM: 40.3
Samples: 4

Max nTPM: 42.4
Min nTPM: 37.7
Sample A Male 39.5
Sample B Male 37.7
Sample C Female 41.6
Sample D Female 42.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
76115730 Antisense, RP_060620_02_B09, Mouse strain C57BL/6J (56 days, male) 2.2
69735616 Antisense, RP_050503_03_B07, Mouse strain C57BL/6J (56 days, male) 1.1

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