HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		95.173
Protein expressioni No data
RNA expressioni
Consensus:5.9 nTPM
HPA Brain:39.3 nTPM
GTEx:5.9 nTPM
FANTOM5:30.2 Scaled Tags Per Million
Mouse:3.3 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA074437
Hippocampal formation mean intensity 95.173
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 79.871
Molecular layer of the dentate gyrus 66.157
Granular dentate gyrus 91.236
CA1 - oriens layer 56.974
CA1 - pyramidal layer 95.173
CA1 - radiatum layer 58.001
CA2 - oriens layer 59.508
CA2 - pyramidal layer 80.840
CA2 - radiatum layer 60.136
CA3 - oriens layer 59.626
CA3 - pyramidal layer 90.025
CA3 - radiatum layer 69.323
Stratum lucidum 63.283
Lacunosum moleculare 42.612
Subiculum 47.363

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.2
1911 Female, age 85, right hemisphere 42.2
2148 Female, age 91, left hemisphere 37.3
2621 Female, age 67, right hemisphere 32.1
2529 Female, age 94, left hemisphere 28.8
1855 Male, age 76, left hemisphere 19.3
1898 Male, age 80, left hemisphere 15.2
Dentate gyrus
nTPM: 29.4
2531 Female, age 67, both hemispheres 47.1
1927 Female, age 91, both hemispheres 44.2
2246 Female, age 85, both hemispheres 32.9
2528 Male, age 74, both hemispheres 23.2
2530 Female, age 94, left hemisphere 16.2
2010 Male, age 76, both hemispheres 13.0
Entorhinal gyrus
nTPM: 22.3
2686 Male, age 75, right hemisphere 30.0
2613 Female, age 94, left hemisphere 26.3
1787 Male, age 76, left hemisphere 23.0
2117 Female, age 91, right hemisphere 21.4
1938 Female, age 85, left hemisphere 17.7
2764 Male, age 80, right hemisphere 15.3
Hippocampus, CA1
nTPM: 39.3
2082 Female, age 91, right hemisphere 56.7
2045 Male, age 76, both hemispheres 42.6
2527 Male, age 74, both hemispheres 37.8
2749 Male, age 80, left hemisphere 34.3
1873 Female, age 85, both hemispheres 25.2
Hippocampus, CA2
nTPM: 27.4
2113 Female, age 91, right hemisphere 54.6
2249 Male, age 74, both hemispheres 28.9
1892 Male, age 76, both hemispheres 26.1
2437 Female, age 94, left hemisphere 20.9
1940 Female, age 85, left hemisphere 20.3
1963 Male, age 80, left hemisphere 13.7
Hippocampus, CA3
nTPM: 34.0
2861 Female, age 67, both hemispheres 42.9
2137 Male, age 80, left hemisphere 39.1
2620 Female, age 94, left hemisphere 38.5
1867 Male, age 76, both hemispheres 34.1
2436 Male, age 74, both hemispheres 25.1
1891 Female, age 85, both hemispheres 24.2
Parahippocampal cortex
nTPM: 28.0
2018 Male, age 76, both hemispheres 43.0
2245 Female, age 91, both hemispheres 36.2
2250 Female, age 67, right hemisphere 34.2
2622 Female, age 67, right hemisphere 31.0
2692 Male, age 74, both hemispheres 30.4
2693 Female, age 94, both hemispheres 25.3
1933 Female, age 85, both hemispheres 25.1
1850 Male, age 80, both hemispheres 18.9
2532 Female, age 72, left hemisphere 18.6
1990 Female, age 91, right hemisphere 17.6
Perirhinal gyrus
nTPM: 21.2
1847 Female, age 91, left hemisphere 25.0
2848 Male, age 76, right hemisphere 20.8
1841 Female, age 85, right hemisphere 20.7
2521 Female, age 94, right hemisphere 20.4
1794 Male, age 80, right hemisphere 18.8
Subiculum
nTPM: 24.8
2729 Female, age 91, right hemisphere 29.0
2042 Male, age 76, both hemispheres 28.6
2619 Male, age 74, both hemispheres 27.0
1901 Male, age 80, both hemispheres 24.4
1977 Female, age 85, both hemispheres 20.4
2438 Female, age 94, left hemisphere 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.9
Samples: 197

Max nTPM: 22.4
Min nTPM: 0.4
Std nTPM: 3.2
Median nTPM: 5.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 22.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 18.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 13.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 13.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 13.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 11.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 11.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 11.5
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 11.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 11.2
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 11.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.2
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 27.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.8
Sample A Male 2.8
Sample B Male 4.0
Sample C Female 3.1
Sample D Female 3.3
Hippocampal formation
nTPM: 1.5
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.0
Sample A Male 1.7
Sample B Male 1.8
Sample C Female 1.0
Sample D Female 1.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
69782784 Antisense, RP_050505_03_G05, Mouse strain C57BL/6J (56 days, male) 13.0

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