HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:38.1 nTPM
HPA Brain:94.7 nTPM
GTEx:38.1 nTPM
FANTOM5:485.5 Scaled Tags Per Million
Pig:65.0 nTPM
Mouse:95.3 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027948
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 94.7
Sample id Sample description nTPM
Hippocampus
nTPM: 77.7
1898 Male, age 80, left hemisphere 94.0
2529 Female, age 94, left hemisphere 81.7
2148 Female, age 91, left hemisphere 81.5
1911 Female, age 85, right hemisphere 72.6
1855 Male, age 76, left hemisphere 71.7
2621 Female, age 67, right hemisphere 64.4
Dentate gyrus
nTPM: 75.4
2528 Male, age 74, both hemispheres 95.3
2010 Male, age 76, both hemispheres 80.4
1927 Female, age 91, both hemispheres 75.7
2530 Female, age 94, left hemisphere 74.8
2246 Female, age 85, both hemispheres 68.4
2531 Female, age 67, both hemispheres 57.8
Entorhinal gyrus
nTPM: 76.4
2117 Female, age 91, right hemisphere 89.9
2764 Male, age 80, right hemisphere 87.5
1938 Female, age 85, left hemisphere 85.6
1787 Male, age 76, left hemisphere 77.2
2686 Male, age 75, right hemisphere 63.3
2613 Female, age 94, left hemisphere 55.1
Hippocampus, CA1
nTPM: 85.9
2749 Male, age 80, left hemisphere 99.8
1873 Female, age 85, both hemispheres 87.4
2527 Male, age 74, both hemispheres 87.2
2082 Female, age 91, right hemisphere 80.5
2045 Male, age 76, both hemispheres 74.7
Hippocampus, CA2
nTPM: 83.8
2249 Male, age 74, both hemispheres 96.6
1892 Male, age 76, both hemispheres 88.2
2113 Female, age 91, right hemisphere 85.7
1963 Male, age 80, left hemisphere 83.8
1940 Female, age 85, left hemisphere 80.2
2437 Female, age 94, left hemisphere 68.6
Hippocampus, CA3
nTPM: 72.8
2137 Male, age 80, left hemisphere 89.4
1867 Male, age 76, both hemispheres 87.5
2436 Male, age 74, both hemispheres 80.3
1891 Female, age 85, both hemispheres 72.7
2620 Female, age 94, left hemisphere 54.8
2861 Female, age 67, both hemispheres 52.3
Parahippocampal cortex
nTPM: 78.2
1850 Male, age 80, both hemispheres 100.4
1933 Female, age 85, both hemispheres 94.5
2250 Female, age 67, right hemisphere 85.9
2245 Female, age 91, both hemispheres 84.5
2018 Male, age 76, both hemispheres 80.1
1990 Female, age 91, right hemisphere 78.1
2532 Female, age 72, left hemisphere 74.8
2692 Male, age 74, both hemispheres 63.4
2693 Female, age 94, both hemispheres 62.0
2622 Female, age 67, right hemisphere 58.1
Perirhinal gyrus
nTPM: 94.7
1794 Male, age 80, right hemisphere 103.0
1847 Female, age 91, left hemisphere 100.6
1841 Female, age 85, right hemisphere 100.5
2848 Male, age 76, right hemisphere 87.0
2521 Female, age 94, right hemisphere 82.2
Subiculum
nTPM: 78.7
1977 Female, age 85, both hemispheres 86.6
2729 Female, age 91, right hemisphere 85.0
2042 Male, age 76, both hemispheres 77.2
2619 Male, age 74, both hemispheres 76.9
1901 Male, age 80, both hemispheres 76.3
2438 Female, age 94, left hemisphere 70.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.1
Samples: 197

Max nTPM: 80.2
Min nTPM: 21.1
Std nTPM: 8.5
Median nTPM: 36.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 80.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 69.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 60.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 59.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 59.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 55.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 55.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 52.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 52.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 52.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 485.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 485.5
FF:10169-103B7 60 years, female 706.2
FF:10153-102I9 76 years, female 264.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.0
Pig sample Sample description nTPM
Subiculum
nTPM: 62.3
Samples: 4

Max nTPM: 72.6
Min nTPM: 55.8
Sample A Female 72.6
Sample B Female 55.8
Sample C Male 57.0
Sample D Male 63.8
Dorsal hippocampus
nTPM: 65.1
Samples: 4

Max nTPM: 81.2
Min nTPM: 48.7
Sample A Female 81.2
Sample B Female 62.8
Sample C Male 67.5
Sample D Male 48.7
Entorhinal cortex
nTPM: 60.6
Samples: 4

Max nTPM: 66.4
Min nTPM: 49.6
Sample A Female 64.7
Sample B Female 66.4
Sample C Male 61.8
Sample D Male 49.6
Ventral hippocampus
nTPM: 57.5
Samples: 4

Max nTPM: 64.6
Min nTPM: 48.2
Sample A Female 64.6
Sample B Female 48.2
Sample C Male 57.8
Sample D Male 59.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.3
Samples: 4

Max nTPM: 102.2
Min nTPM: 83.2
Sample A Male 83.2
Sample B Male 95.0
Sample C Female 102.2
Sample D Female 100.8
Hippocampal formation
nTPM: 88.1
Samples: 4

Max nTPM: 95.2
Min nTPM: 78.8
Sample A Male 87.5
Sample B Male 78.8
Sample C Female 95.2
Sample D Female 91.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
74047917 Antisense, RP_051214_02_D02, Mouse strain C57BL/6J (56 days, male) 7.3
67815551 Antisense, RP_040920_01_H11, Mouse strain C57BL/6J (56 days, male) 4.6

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