HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:245.6 nTPM
HPA Brain:137.8 nTPM
GTEx:245.6 nTPM
FANTOM5:55.8 Scaled Tags Per Million
Pig:72.4 nTPM
Mouse:50.4 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061691
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 137.8
Sample id Sample description nTPM
Hippocampus
nTPM: 128.4
2529 Female, age 94, left hemisphere 160.1
1911 Female, age 85, right hemisphere 134.5
1855 Male, age 76, left hemisphere 126.3
2621 Female, age 67, right hemisphere 122.5
2148 Female, age 91, left hemisphere 114.7
1898 Male, age 80, left hemisphere 112.4
Dentate gyrus
nTPM: 137.8
2530 Female, age 94, left hemisphere 213.4
2528 Male, age 74, both hemispheres 178.5
2010 Male, age 76, both hemispheres 159.0
2246 Female, age 85, both hemispheres 122.2
2531 Female, age 67, both hemispheres 88.5
1927 Female, age 91, both hemispheres 65.2
Entorhinal gyrus
nTPM: 94.8
2117 Female, age 91, right hemisphere 170.0
2764 Male, age 80, right hemisphere 111.7
1787 Male, age 76, left hemisphere 88.9
1938 Female, age 85, left hemisphere 72.3
2686 Male, age 75, right hemisphere 72.0
2613 Female, age 94, left hemisphere 54.2
Hippocampus, CA1
nTPM: 113.3
2082 Female, age 91, right hemisphere 189.1
2527 Male, age 74, both hemispheres 128.4
1873 Female, age 85, both hemispheres 102.8
2045 Male, age 76, both hemispheres 79.9
2749 Male, age 80, left hemisphere 66.5
Hippocampus, CA2
nTPM: 132.3
2249 Male, age 74, both hemispheres 235.0
1940 Female, age 85, left hemisphere 167.7
2113 Female, age 91, right hemisphere 119.0
1963 Male, age 80, left hemisphere 110.7
2437 Female, age 94, left hemisphere 109.2
1892 Male, age 76, both hemispheres 52.3
Hippocampus, CA3
nTPM: 90.4
2620 Female, age 94, left hemisphere 129.8
2436 Male, age 74, both hemispheres 112.1
1891 Female, age 85, both hemispheres 92.3
2861 Female, age 67, both hemispheres 78.9
1867 Male, age 76, both hemispheres 70.2
2137 Male, age 80, left hemisphere 59.4
Parahippocampal cortex
nTPM: 71.7
2018 Male, age 76, both hemispheres 94.8
2532 Female, age 72, left hemisphere 90.9
2692 Male, age 74, both hemispheres 90.8
1933 Female, age 85, both hemispheres 80.7
1850 Male, age 80, both hemispheres 75.5
2245 Female, age 91, both hemispheres 73.2
1990 Female, age 91, right hemisphere 65.4
2622 Female, age 67, right hemisphere 59.1
2693 Female, age 94, both hemispheres 47.2
2250 Female, age 67, right hemisphere 39.5
Perirhinal gyrus
nTPM: 61.7
1794 Male, age 80, right hemisphere 85.4
2848 Male, age 76, right hemisphere 70.1
2521 Female, age 94, right hemisphere 54.5
1847 Female, age 91, left hemisphere 51.0
1841 Female, age 85, right hemisphere 47.8
Subiculum
nTPM: 111.4
2042 Male, age 76, both hemispheres 159.7
2729 Female, age 91, right hemisphere 128.5
2619 Male, age 74, both hemispheres 116.0
1977 Female, age 85, both hemispheres 102.9
1901 Male, age 80, both hemispheres 94.1
2438 Female, age 94, left hemisphere 67.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 245.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 245.6
Samples: 197

Max nTPM: 898.9
Min nTPM: 34.4
Std nTPM: 144.4
Median nTPM: 207.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 898.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 730.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 685.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 671.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 623.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 590.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 582.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 580.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 580.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 533.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 518.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.8
FF:10153-102I9 76 years, female 66.0
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.4
Pig sample Sample description nTPM
Subiculum
nTPM: 22.9
Samples: 4

Max nTPM: 36.5
Min nTPM: 16.5
Sample A Female 18.1
Sample B Female 20.5
Sample C Male 16.5
Sample D Male 36.5
Dorsal hippocampus
nTPM: 72.4
Samples: 4

Max nTPM: 130.9
Min nTPM: 23.3
Sample A Female 130.9
Sample B Female 50.0
Sample C Male 85.5
Sample D Male 23.3
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 19.8
Min nTPM: 12.2
Sample A Female 19.8
Sample B Female 19.2
Sample C Male 15.4
Sample D Male 12.2
Ventral hippocampus
nTPM: 49.9
Samples: 4

Max nTPM: 70.8
Min nTPM: 17.3
Sample A Female 70.8
Sample B Female 17.3
Sample C Male 42.9
Sample D Male 68.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 38.1
Min nTPM: 27.7
Sample A Male 35.8
Sample B Male 37.7
Sample C Female 38.1
Sample D Female 27.7
Hippocampal formation
nTPM: 50.4
Samples: 4

Max nTPM: 61.5
Min nTPM: 39.0
Sample A Male 39.8
Sample B Male 39.0
Sample C Female 61.5
Sample D Female 61.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
68341262 Antisense, RP_041207_01_C02, Mouse strain C57BL/6J (56 days, male) 5.2
70813926 Antisense, RP_050725_02_F06, Mouse strain C57BL/6J (56 days, male) 1.9

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