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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
726.4
nTPM
Monaco:
1462.3
nTPM
Schmiedel:
411.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
726.4
HPA sample
nTPM
gdT-cell nTPM: 726.5
Samples: 6
Max nTPM: 916.0
Min nTPM: 610.3
P10809_1007
685.1
P10809_1022
916.0
P10809_1041
756.0
P10809_1060
610.3
P10809_1077
755.2
P10809_1098
636.2
MAIT T-cell nTPM: 326.5
Samples: 6
Max nTPM: 353.2
Min nTPM: 266.9
P10809_1006
351.4
P10809_1024
266.9
P10809_1043
347.6
P10809_1062
294.7
P10809_1083
344.9
P10809_1097
353.2
Memory CD4 T-cell nTPM: 350.0
Samples: 6
Max nTPM: 461.8
Min nTPM: 273.4
P10809_1014
315.4
P10809_1026
278.5
P10809_1045
317.3
P10809_1064
453.4
P10809_1086
461.8
P10809_1113
273.4
Memory CD8 T-cell nTPM: 505.0
Samples: 5
Max nTPM: 604.3
Min nTPM: 370.7
P10809_1012
481.4
P10809_1027
513.4
P10809_1046
604.3
P10809_1065
555.3
P10809_1111
370.7
Naive CD4 T-cell nTPM: 232.8
Samples: 6
Max nTPM: 306.7
Min nTPM: 172.1
P10809_1015
235.9
P10809_1030
172.1
P10809_1049
182.9
P10809_1068
257.0
P10809_1085
306.7
P10809_1112
241.9
Naive CD8 T-cell nTPM: 396.2
Samples: 6
Max nTPM: 621.8
Min nTPM: 259.8
P10809_1016
259.8
P10809_1031
348.2
P10809_1050
408.4
P10809_1069
476.0
P10809_1087
621.8
P10809_1110
262.8
T-reg nTPM: 287.3
Samples: 6
Max nTPM: 441.3
Min nTPM: 214.7
P10809_1018
351.2
P10809_1037
217.4
P10809_1056
214.7
P10809_1075
268.7
P10809_1094
441.3
P10809_1106
230.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1462.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 608.9
Samples: 4
Max nTPM: 731.2
Min nTPM: 479.1
RHH5202_R3573
479.1
RHH5230_R3602
731.2
RHH5259_R3631
677.4
RHH5288_R3660
547.8
Effector memory CD8 T-cell nTPM: 1230.0
Samples: 4
Max nTPM: 1373.3
Min nTPM: 1023.8
RHH5203_R3574
1023.8
RHH5231_R3603
1232.3
RHH5260_R3632
1373.3
RHH5289_R3661
1290.5
MAIT T-cell nTPM: 617.3
Samples: 4
Max nTPM: 688.2
Min nTPM: 469.6
RHH5233_R3605
655.4
RHH5205_R3576
656.1
RHH5262_R3634
688.2
RHH5297_R3663
469.6
Memory CD4 T-cell TFH nTPM: 591.3
Samples: 4
Max nTPM: 646.9
Min nTPM: 520.2
RHH5300_R3666
520.2
RHH5236_R3608
581.8
RHH5265_R3637
616.4
RHH5208_R3579
646.9
Memory CD4 T-cell Th1 nTPM: 689.4
Samples: 4
Max nTPM: 857.2
Min nTPM: 528.0
RHH5210_R3581
528.0
RHH5302_R3668
597.6
RHH5238_R3610
857.2
RHH5267_R3639
774.8
Memory CD4 T-cell Th1/Th17 nTPM: 663.3
Samples: 4
Max nTPM: 793.9
Min nTPM: 561.2
RHH5303_R3669
638.8
RHH5211_R3582
561.2
RHH5239_R3611
793.9
RHH5268_R3640
659.2
Memory CD4 T-cell Th17 nTPM: 617.1
Samples: 4
Max nTPM: 851.3
Min nTPM: 466.7
RHH5304_R3670
536.5
RHH5212_R3583
466.7
RHH5240_R3612
851.3
RHH5269_R3641
614.0
Memory CD4 T-cell Th2 nTPM: 559.0
Samples: 4
Max nTPM: 614.6
Min nTPM: 465.9
RHH5305_R3671
574.7
RHH5213_R3584
465.9
RHH5241_R3613
580.9
RHH5270_R3642
614.6
Naive CD4 T-cell nTPM: 538.9
Samples: 4
Max nTPM: 577.6
Min nTPM: 484.4
RHH5306_R3672
537.7
RHH5214_R3585
484.4
RHH5242_R3614
555.7
RHH5271_R3643
577.6
Naive CD8 T-cell nTPM: 395.1
Samples: 4
Max nTPM: 429.3
Min nTPM: 350.8
RHH5201_R3572
398.7
RHH5229_R3601
401.5
RHH5258_R3630
350.8
RHH5287_R3659
429.3
Non-Vd2 gdTCR nTPM: 1462.4
Samples: 4
Max nTPM: 1771.2
Min nTPM: 1199.5
RHH5235_R3607
1574.6
RHH5264_R3636
1304.1
RHH5207_R3578
1771.2
RHH5299_R3665
1199.5
T-reg nTPM: 466.2
Samples: 4
Max nTPM: 528.8
Min nTPM: 418.4
RHH5301_R3667
418.4
RHH5237_R3609
528.8
RHH5266_R3638
488.1
RHH5209_R3580
429.5
Terminal effector memory CD4 T-cell nTPM: 1459.2
Samples: 2
Max nTPM: 1613.5
Min nTPM: 1304.9
RHH5243_R3615
1613.5
RHH5272_R3644
1304.9
Terminal effector memory CD8 T-cell nTPM: 1460.7
Samples: 4
Max nTPM: 1839.3
Min nTPM: 1096.4
RHH5232_R3604
1541.5
RHH5204_R3575
1096.4
RHH5261_R3633
1839.3
RHH5296_R3662
1365.6
Vd2 gdTCR nTPM: 962.0
Samples: 4
Max nTPM: 1161.9
Min nTPM: 698.3
RHH5234_R3606
869.6
RHH5206_R3577
1161.9
RHH5263_R3635
1118.1
RHH5298_R3664
698.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.