HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:36.1 nTPM
GTEx:9.5 nTPM
FANTOM5:44.9 Scaled Tags Per Million
Pig:39.4 nTPM
Mouse:20.7 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB016157Antibody CAB069879
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2621 Female, age 67, right hemisphere 28.3
2529 Female, age 94, left hemisphere 22.6
1911 Female, age 85, right hemisphere 20.3
2148 Female, age 91, left hemisphere 19.9
1855 Male, age 76, left hemisphere 19.4
1898 Male, age 80, left hemisphere 18.0
Dentate gyrus
nTPM: 23.8
2531 Female, age 67, both hemispheres 31.3
2010 Male, age 76, both hemispheres 26.7
1927 Female, age 91, both hemispheres 24.9
2530 Female, age 94, left hemisphere 20.8
2528 Male, age 74, both hemispheres 20.7
2246 Female, age 85, both hemispheres 18.6
Entorhinal gyrus
nTPM: 27.1
1938 Female, age 85, left hemisphere 30.6
2613 Female, age 94, left hemisphere 29.0
1787 Male, age 76, left hemisphere 28.7
2764 Male, age 80, right hemisphere 28.2
2117 Female, age 91, right hemisphere 23.2
2686 Male, age 75, right hemisphere 23.1
Hippocampus, CA1
nTPM: 25.2
2045 Male, age 76, both hemispheres 46.6
2527 Male, age 74, both hemispheres 22.9
2082 Female, age 91, right hemisphere 21.1
2749 Male, age 80, left hemisphere 18.2
1873 Female, age 85, both hemispheres 17.0
Hippocampus, CA2
nTPM: 20.7
1892 Male, age 76, both hemispheres 35.7
2437 Female, age 94, left hemisphere 22.7
2113 Female, age 91, right hemisphere 18.6
1940 Female, age 85, left hemisphere 18.4
2249 Male, age 74, both hemispheres 18.1
1963 Male, age 80, left hemisphere 10.8
Hippocampus, CA3
nTPM: 26.3
1867 Male, age 76, both hemispheres 49.5
2861 Female, age 67, both hemispheres 26.7
2436 Male, age 74, both hemispheres 25.7
2620 Female, age 94, left hemisphere 24.7
2137 Male, age 80, left hemisphere 16.2
1891 Female, age 85, both hemispheres 14.9
Parahippocampal cortex
nTPM: 31.0
2250 Female, age 67, right hemisphere 40.1
2245 Female, age 91, both hemispheres 39.1
2693 Female, age 94, both hemispheres 34.4
2532 Female, age 72, left hemisphere 33.5
1990 Female, age 91, right hemisphere 33.3
2622 Female, age 67, right hemisphere 31.1
1933 Female, age 85, both hemispheres 27.4
1850 Male, age 80, both hemispheres 26.6
2018 Male, age 76, both hemispheres 26.6
2692 Male, age 74, both hemispheres 17.8
Perirhinal gyrus
nTPM: 36.1
1847 Female, age 91, left hemisphere 39.9
1841 Female, age 85, right hemisphere 36.5
2521 Female, age 94, right hemisphere 35.9
1794 Male, age 80, right hemisphere 35.5
2848 Male, age 76, right hemisphere 32.7
Subiculum
nTPM: 21.3
2042 Male, age 76, both hemispheres 26.7
2619 Male, age 74, both hemispheres 25.8
2438 Female, age 94, left hemisphere 24.3
1977 Female, age 85, both hemispheres 21.4
2729 Female, age 91, right hemisphere 16.3
1901 Male, age 80, both hemispheres 13.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 43.5
Min nTPM: 1.4
Std nTPM: 5.7
Median nTPM: 8.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 35.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 32.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 31.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 31.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 21.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 21.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 20.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 20.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.9
FF:10153-102I9 76 years, female 50.4
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.4
Pig sample Sample description nTPM
Subiculum
nTPM: 34.6
Samples: 4

Max nTPM: 39.1
Min nTPM: 30.8
Sample A Female 39.1
Sample B Female 30.8
Sample C Male 33.0
Sample D Male 35.6
Dorsal hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 39.0
Min nTPM: 26.7
Sample A Female 39.0
Sample B Female 30.9
Sample C Male 30.0
Sample D Male 26.7
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 44.2
Min nTPM: 34.9
Sample A Female 42.5
Sample B Female 44.2
Sample C Male 36.2
Sample D Male 34.9
Ventral hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 35.5
Min nTPM: 21.5
Sample A Female 26.6
Sample B Female 21.5
Sample C Male 35.5
Sample D Male 31.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.0
Sample A Male 18.0
Sample B Male 21.3
Sample C Female 20.3
Sample D Female 23.3
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 20.3
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 18.7
Sample C Female 20.3
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
81790672 Antisense, RP_090724_05_F04, Mouse strain C57BL/6J (56 days, male) 15.9
74635761 Antisense, RP_060215_04_D02, Mouse strain C57BL/6J (56 days, male) 0.6

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