HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.8 nTPM
HPA Brain:22.7 nTPM
GTEx:39.8 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:36.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054018
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.4
1898 Male, age 80, left hemisphere 23.2
1911 Female, age 85, right hemisphere 23.1
2148 Female, age 91, left hemisphere 20.5
1855 Male, age 76, left hemisphere 20.1
2529 Female, age 94, left hemisphere 19.7
2621 Female, age 67, right hemisphere 15.9
Dentate gyrus
nTPM: 21.0
2528 Male, age 74, both hemispheres 23.3
1927 Female, age 91, both hemispheres 22.1
2246 Female, age 85, both hemispheres 21.6
2530 Female, age 94, left hemisphere 20.9
2010 Male, age 76, both hemispheres 20.4
2531 Female, age 67, both hemispheres 17.8
Entorhinal gyrus
nTPM: 19.4
1938 Female, age 85, left hemisphere 22.7
2117 Female, age 91, right hemisphere 22.2
2686 Male, age 75, right hemisphere 18.7
2764 Male, age 80, right hemisphere 18.0
1787 Male, age 76, left hemisphere 17.6
2613 Female, age 94, left hemisphere 17.3
Hippocampus, CA1
nTPM: 22.7
1873 Female, age 85, both hemispheres 25.4
2749 Male, age 80, left hemisphere 23.0
2527 Male, age 74, both hemispheres 22.2
2082 Female, age 91, right hemisphere 21.9
2045 Male, age 76, both hemispheres 20.9
Hippocampus, CA2
nTPM: 21.8
1963 Male, age 80, left hemisphere 23.2
2113 Female, age 91, right hemisphere 23.1
2249 Male, age 74, both hemispheres 23.1
1892 Male, age 76, both hemispheres 22.0
1940 Female, age 85, left hemisphere 21.0
2437 Female, age 94, left hemisphere 18.3
Hippocampus, CA3
nTPM: 21.4
1867 Male, age 76, both hemispheres 26.8
1891 Female, age 85, both hemispheres 24.2
2137 Male, age 80, left hemisphere 23.7
2436 Male, age 74, both hemispheres 21.0
2861 Female, age 67, both hemispheres 16.9
2620 Female, age 94, left hemisphere 15.8
Parahippocampal cortex
nTPM: 21.5
2693 Female, age 94, both hemispheres 23.9
1850 Male, age 80, both hemispheres 22.8
1933 Female, age 85, both hemispheres 22.7
2692 Male, age 74, both hemispheres 22.7
2018 Male, age 76, both hemispheres 22.5
2250 Female, age 67, right hemisphere 22.5
1990 Female, age 91, right hemisphere 21.9
2245 Female, age 91, both hemispheres 21.7
2532 Female, age 72, left hemisphere 20.1
2622 Female, age 67, right hemisphere 14.3
Perirhinal gyrus
nTPM: 20.8
1841 Female, age 85, right hemisphere 22.7
2848 Male, age 76, right hemisphere 21.7
2521 Female, age 94, right hemisphere 21.1
1794 Male, age 80, right hemisphere 19.3
1847 Female, age 91, left hemisphere 19.3
Subiculum
nTPM: 21.7
2042 Male, age 76, both hemispheres 24.9
1901 Male, age 80, both hemispheres 23.9
1977 Female, age 85, both hemispheres 22.0
2438 Female, age 94, left hemisphere 21.2
2729 Female, age 91, right hemisphere 21.1
2619 Male, age 74, both hemispheres 17.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.8
Samples: 197

Max nTPM: 77.9
Min nTPM: 17.9
Std nTPM: 10.7
Median nTPM: 38.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 77.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 71.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 69.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 65.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 63.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 62.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 62.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 62.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 61.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 57.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10153-102I9 76 years, female 68.5
FF:10169-103B7 60 years, female 59.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.9
Pig sample Sample description nTPM
Subiculum
nTPM: 34.6
Samples: 4

Max nTPM: 40.1
Min nTPM: 25.3
Sample A Female 25.3
Sample B Female 35.0
Sample C Male 38.0
Sample D Male 40.1
Dorsal hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 42.6
Min nTPM: 30.4
Sample A Female 30.4
Sample B Female 38.6
Sample C Male 40.2
Sample D Male 42.6
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 42.3
Min nTPM: 33.1
Sample A Female 35.3
Sample B Female 33.9
Sample C Male 33.1
Sample D Male 42.3
Ventral hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 42.9
Min nTPM: 27.7
Sample A Female 37.4
Sample B Female 42.9
Sample C Male 27.7
Sample D Male 37.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 35.5
Min nTPM: 27.6
Sample A Male 27.6
Sample B Male 34.8
Sample C Female 35.5
Sample D Female 29.0
Hippocampal formation
nTPM: 36.7
Samples: 4

Max nTPM: 38.1
Min nTPM: 35.3
Sample A Male 35.3
Sample B Male 37.5
Sample C Female 38.1
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69549647 Antisense, RP_050310_02_C06, Mouse strain C57BL/6J (56 days, male) 2.0

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