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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
164.7
nTPM
Monaco:
211.4
nTPM
Schmiedel:
21.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
164.7
HPA sample
nTPM
gdT-cell nTPM: 164.7
Samples: 6
Max nTPM: 235.7
Min nTPM: 100.9
P10809_1007
100.9
P10809_1022
186.9
P10809_1041
235.7
P10809_1060
132.9
P10809_1077
160.7
P10809_1098
170.9
MAIT T-cell nTPM: 146.0
Samples: 6
Max nTPM: 166.3
Min nTPM: 117.3
P10809_1006
117.3
P10809_1024
157.2
P10809_1043
166.3
P10809_1062
145.3
P10809_1083
138.8
P10809_1097
150.8
Memory CD4 T-cell nTPM: 143.7
Samples: 6
Max nTPM: 165.2
Min nTPM: 96.4
P10809_1014
96.4
P10809_1026
145.4
P10809_1045
165.2
P10809_1064
149.8
P10809_1086
156.4
P10809_1113
149.2
Memory CD8 T-cell nTPM: 147.4
Samples: 5
Max nTPM: 182.1
Min nTPM: 123.2
P10809_1012
123.2
P10809_1027
130.5
P10809_1046
164.4
P10809_1065
182.1
P10809_1111
136.9
Naive CD4 T-cell nTPM: 112.8
Samples: 6
Max nTPM: 163.1
Min nTPM: 69.8
P10809_1015
69.8
P10809_1030
106.4
P10809_1049
163.1
P10809_1068
107.6
P10809_1085
123.9
P10809_1112
106.1
Naive CD8 T-cell nTPM: 132.1
Samples: 6
Max nTPM: 174.9
Min nTPM: 74.2
P10809_1016
74.2
P10809_1031
143.8
P10809_1050
139.2
P10809_1069
157.4
P10809_1087
174.9
P10809_1110
103.3
T-reg nTPM: 151.3
Samples: 6
Max nTPM: 168.7
Min nTPM: 116.5
P10809_1018
116.5
P10809_1037
163.2
P10809_1056
168.7
P10809_1075
152.9
P10809_1094
161.5
P10809_1106
145.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.7
Samples: 4
Max nTPM: 163.0
Min nTPM: 98.1
RHH5202_R3573
112.7
RHH5230_R3602
163.0
RHH5259_R3631
100.8
RHH5288_R3660
98.1
Effector memory CD8 T-cell nTPM: 197.4
Samples: 4
Max nTPM: 239.4
Min nTPM: 168.3
RHH5203_R3574
196.8
RHH5231_R3603
168.3
RHH5260_R3632
184.9
RHH5289_R3661
239.4
MAIT T-cell nTPM: 140.9
Samples: 4
Max nTPM: 190.6
Min nTPM: 112.4
RHH5233_R3605
139.1
RHH5205_R3576
190.6
RHH5262_R3634
121.5
RHH5297_R3663
112.4
Memory CD4 T-cell TFH nTPM: 120.6
Samples: 4
Max nTPM: 153.6
Min nTPM: 97.3
RHH5300_R3666
97.3
RHH5236_R3608
153.6
RHH5265_R3637
118.0
RHH5208_R3579
113.6
Memory CD4 T-cell Th1 nTPM: 117.6
Samples: 4
Max nTPM: 126.7
Min nTPM: 107.1
RHH5210_R3581
121.6
RHH5302_R3668
107.1
RHH5238_R3610
115.0
RHH5267_R3639
126.7
Memory CD4 T-cell Th1/Th17 nTPM: 139.6
Samples: 4
Max nTPM: 191.7
Min nTPM: 118.0
RHH5303_R3669
127.9
RHH5211_R3582
191.7
RHH5239_R3611
118.0
RHH5268_R3640
120.6
Memory CD4 T-cell Th17 nTPM: 141.2
Samples: 4
Max nTPM: 161.8
Min nTPM: 116.2
RHH5304_R3670
139.3
RHH5212_R3583
147.6
RHH5240_R3612
161.8
RHH5269_R3641
116.2
Memory CD4 T-cell Th2 nTPM: 135.0
Samples: 4
Max nTPM: 161.8
Min nTPM: 121.7
RHH5305_R3671
121.7
RHH5213_R3584
161.8
RHH5241_R3613
130.4
RHH5270_R3642
126.1
Naive CD4 T-cell nTPM: 94.3
Samples: 4
Max nTPM: 110.7
Min nTPM: 80.2
RHH5306_R3672
80.2
RHH5214_R3585
110.7
RHH5242_R3614
82.7
RHH5271_R3643
103.6
Naive CD8 T-cell nTPM: 92.3
Samples: 4
Max nTPM: 124.6
Min nTPM: 71.4
RHH5201_R3572
124.6
RHH5229_R3601
71.4
RHH5258_R3630
72.7
RHH5287_R3659
100.5
Non-Vd2 gdTCR nTPM: 211.4
Samples: 4
Max nTPM: 255.0
Min nTPM: 173.4
RHH5235_R3607
255.0
RHH5264_R3636
211.0
RHH5207_R3578
206.1
RHH5299_R3665
173.4
T-reg nTPM: 122.3
Samples: 4
Max nTPM: 163.8
Min nTPM: 95.2
RHH5301_R3667
95.2
RHH5237_R3609
163.8
RHH5266_R3638
113.8
RHH5209_R3580
116.4
Terminal effector memory CD4 T-cell nTPM: 178.3
Samples: 2
Max nTPM: 224.3
Min nTPM: 132.3
RHH5243_R3615
224.3
RHH5272_R3644
132.3
Terminal effector memory CD8 T-cell nTPM: 175.6
Samples: 4
Max nTPM: 209.2
Min nTPM: 155.0
RHH5232_R3604
170.4
RHH5204_R3575
167.7
RHH5261_R3633
209.2
RHH5296_R3662
155.0
Vd2 gdTCR nTPM: 148.7
Samples: 4
Max nTPM: 218.0
Min nTPM: 108.1
RHH5234_R3606
108.1
RHH5206_R3577
218.0
RHH5263_R3635
153.9
RHH5298_R3664
114.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
