HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:191.9 nTPM
HPA Brain:113.1 nTPM
GTEx:191.9 nTPM
FANTOM5:263.4 Scaled Tags Per Million
Pig:48.5 nTPM
Mouse:22.3 nTPM
Allen mouse:16.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061571
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 113.1
Sample id Sample description nTPM
Hippocampus
nTPM: 102.5
2148 Female, age 91, left hemisphere 123.1
2621 Female, age 67, right hemisphere 114.7
1911 Female, age 85, right hemisphere 109.0
2529 Female, age 94, left hemisphere 103.4
1855 Male, age 76, left hemisphere 100.9
1898 Male, age 80, left hemisphere 63.9
Dentate gyrus
nTPM: 108.2
2531 Female, age 67, both hemispheres 138.2
2246 Female, age 85, both hemispheres 122.3
2530 Female, age 94, left hemisphere 105.6
2528 Male, age 74, both hemispheres 99.3
2010 Male, age 76, both hemispheres 94.5
1927 Female, age 91, both hemispheres 89.0
Entorhinal gyrus
nTPM: 102.2
2613 Female, age 94, left hemisphere 123.9
2686 Male, age 75, right hemisphere 115.8
1787 Male, age 76, left hemisphere 108.8
2764 Male, age 80, right hemisphere 102.7
2117 Female, age 91, right hemisphere 92.4
1938 Female, age 85, left hemisphere 69.7
Hippocampus, CA1
nTPM: 102.8
2082 Female, age 91, right hemisphere 139.3
2045 Male, age 76, both hemispheres 121.0
1873 Female, age 85, both hemispheres 95.1
2527 Male, age 74, both hemispheres 88.1
2749 Male, age 80, left hemisphere 70.5
Hippocampus, CA2
nTPM: 98.5
2113 Female, age 91, right hemisphere 124.5
1940 Female, age 85, left hemisphere 121.5
2437 Female, age 94, left hemisphere 102.3
2249 Male, age 74, both hemispheres 96.4
1892 Male, age 76, both hemispheres 76.6
1963 Male, age 80, left hemisphere 69.4
Hippocampus, CA3
nTPM: 113.1
2620 Female, age 94, left hemisphere 150.0
2436 Male, age 74, both hemispheres 119.8
2861 Female, age 67, both hemispheres 118.5
1891 Female, age 85, both hemispheres 102.5
1867 Male, age 76, both hemispheres 96.4
2137 Male, age 80, left hemisphere 91.7
Parahippocampal cortex
nTPM: 106.3
2622 Female, age 67, right hemisphere 148.7
2693 Female, age 94, both hemispheres 117.1
2018 Male, age 76, both hemispheres 115.4
2692 Male, age 74, both hemispheres 115.0
2245 Female, age 91, both hemispheres 111.4
2532 Female, age 72, left hemisphere 106.8
2250 Female, age 67, right hemisphere 98.3
1990 Female, age 91, right hemisphere 94.1
1850 Male, age 80, both hemispheres 80.5
1933 Female, age 85, both hemispheres 75.7
Perirhinal gyrus
nTPM: 79.7
2848 Male, age 76, right hemisphere 98.0
2521 Female, age 94, right hemisphere 87.8
1794 Male, age 80, right hemisphere 72.9
1841 Female, age 85, right hemisphere 70.6
1847 Female, age 91, left hemisphere 69.3
Subiculum
nTPM: 108.2
2042 Male, age 76, both hemispheres 137.9
2729 Female, age 91, right hemisphere 119.6
2619 Male, age 74, both hemispheres 107.7
2438 Female, age 94, left hemisphere 101.8
1901 Male, age 80, both hemispheres 97.7
1977 Female, age 85, both hemispheres 84.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 191.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 191.9
Samples: 197

Max nTPM: 393.3
Min nTPM: 14.1
Std nTPM: 65.3
Median nTPM: 184.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 393.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 377.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 377.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 371.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 345.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 326.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 318.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 314.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 313.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 312.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 310.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 263.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 263.4
FF:10153-102I9 76 years, female 326.4
FF:10169-103B7 60 years, female 200.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.5
Pig sample Sample description nTPM
Subiculum
nTPM: 45.3
Samples: 4

Max nTPM: 53.9
Min nTPM: 32.2
Sample A Female 32.2
Sample B Female 49.8
Sample C Male 45.3
Sample D Male 53.9
Dorsal hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 55.2
Min nTPM: 39.5
Sample A Female 39.5
Sample B Female 45.1
Sample C Male 55.2
Sample D Male 48.9
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 52.9
Min nTPM: 30.4
Sample A Female 37.3
Sample B Female 37.1
Sample C Male 30.4
Sample D Male 52.9
Ventral hippocampus
nTPM: 48.5
Samples: 4

Max nTPM: 57.3
Min nTPM: 44.0
Sample A Female 44.0
Sample B Female 46.9
Sample C Male 45.9
Sample D Male 57.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 23.5
Min nTPM: 10.2
Sample A Male 18.1
Sample B Male 23.5
Sample C Female 20.7
Sample D Female 10.2
Hippocampal formation
nTPM: 22.3
Samples: 4

Max nTPM: 28.6
Min nTPM: 11.8
Sample A Male 28.6
Sample B Male 21.7
Sample C Female 11.8
Sample D Female 26.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.7
77620457 Antisense, RP_070129_03_D05, Mouse strain C57BL/6J (56 days, male) 16.7

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